RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 SCNN1AP37088 669 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 USP8P40818 1118 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 ZNF165P49910 485 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 NRLP54845 237 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 YWHAZP63104 245 aaKnown RBP10.13□□□□□ -0.79
RNF4-221ENST00000513643 DMWDQ09019 674 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 SYCP1Q15431 976 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 HSF5Q4G112 596 aaPredicted RBP10.13□□□□□ -0.79
RNF4-221ENST00000513643 FKBP15Q5T1M5 1219 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 ADGRF1Q5T601 910 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 RSRC2Q7L4I2 434 aaKnown RBP10.13□□□□□ -0.79
RNF4-221ENST00000513643 SLC26A9Q7LBE3 791 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 BNIPLQ7Z465 357 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 KIAA0907Q7Z7F0 614 aaPredicted RBP10.13□□□□□ -0.79
RNF4-221ENST00000513643 ALYREFQ86V81 257 aaKnown RBP10.13□□□□□ -0.79
RNF4-221ENST00000513643 ZNF677Q86XU0 584 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 DENND1CQ8IV53 801 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 CAMKK1Q8N5S9 505 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 IL17RCQ8NAC3 791 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 OLIG1Q8TAK6 271 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 RNF139Q8WU17 664 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 NT5C3BQ969T7 300 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 LMLNQ96KR4 655 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 EPC1Q9H2F5 836 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 POPDC2Q9HBU9 364 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 POLR3BQ9NW08 1133 aaPredicted RBP10.13□□□□□ -0.79
RNF4-221ENST00000513643 DEC1Q9P2X7 70 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 CLEC4EQ9ULY5 219 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 TLR6Q9Y2C9 796 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 R4GN57 208 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 ATG2BQ96BY7 2078 aa10.13□□□□□ -0.79
RNF4-221ENST00000513643 CEP250Q9BV73 2442 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 A0A1B0GTH6 734 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 SYCE3A1L190 88 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 KCNU1A8MYU2 1149 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 PRRT4C9JH25 899 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 MSI1O43347 362 aaKnown RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 HRO43593 1189 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ADAM23O75077 832 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 LSM8O95777 96 aaKnown RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 CAVIN2O95810 425 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 NCAM1P13591 858 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 HNRNPLP14866 589 aaKnown RBP eCLIP10.12□□□□□ -0.79
RNF4-221ENST00000513643 PTMSP20962 102 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 KRT9P35527 623 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 SOX5P35711 763 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 HARS2P49590 506 aaKnown RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 ZNF445P59923 1031 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 POLR2FP61218 127 aaKnown RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 PITX1P78337 314 aaPredicted RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 FMO1Q01740 532 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 CDR2Q01850 454 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ENPP2Q13822 863 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 RAPGEF1Q13905 1077 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 PPP2R5DQ14738 602 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 NR1I3Q14994 352 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 FAM133BQ5BKY9 247 aaKnown RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 EFHC1Q5JVL4 640 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 MPP7Q5T2T1 576 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ARTNQ5T4W7 220 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 EMC10Q5UCC4 262 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 NADSYN1Q6IA69 706 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ZC3H14Q6PJT7 736 aaKnown RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 ARCQ7LC44 396 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 WDR5BQ86VZ2 330 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 LONP2Q86WA8 852 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 RASSF3Q86WH2 238 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ZDHHC17Q8IUH5 632 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 NAT16Q8N8M0 369 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 TERB1Q8NA31 727 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 TMEM35BQ8NCS4 154 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 C1orf131Q8NDD1 294 aaKnown RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 RPLP0P6Q8NHW5 317 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 NKD2Q969F2 451 aaPredicted RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 NAP1L5Q96NT1 182 aaPredicted RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 SYT11Q9BT88 431 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 TRIM62Q9BVG3 475 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 BBS2Q9BXC9 721 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 SLC2A11Q9BYW1 496 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ARHGEF4Q9NR80 690 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 ST7Q9NRC1 585 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 FAM207AQ9NSI2 230 aaPredicted RBP10.12□□□□□ -0.79
RNF4-221ENST00000513643 LAMA1P25391 3075 aa10.12□□□□□ -0.79
RNF4-221ENST00000513643 A0A1W2PQC6 194 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 NEDD8-MDP1E9PL57 170 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 PES1O00541 588 aaKnown RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 IRAK2O43187 625 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 HSF2BPO75031 334 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 LMNAP02545 664 aaKnown RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 APODP05090 189 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TPM2P07951 284 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 HMBSP08397 361 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 MMEP08473 750 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 UNGP13051 313 aaPredicted RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 CDK11BP21127 795 aaKnown RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 HOXD9P28356 352 aaPredicted RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 SLC6A4P31645 630 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 CNR2P34972 360 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms