RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 ADGRF1Q5T601 910 aa16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 WDR5BQ86VZ2 330 aa16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 PASD1Q8IV76 773 aa16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 DHX40Q8IX18 779 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 IL17RCQ8NAC3 791 aa16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 GOLGA1Q92805 767 aa16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 DNAJC17Q9NVM6 304 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-216ENST00000511767 LGALS16A8MUM7 142 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 PRRT4C9JH25 899 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 EPHB6O15197 1021 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 ATP1A3P13637 1013 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 CDH5P33151 784 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 CNR2P34972 360 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 TIE1P35590 1138 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 PXNP49023 591 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 TBX4P57082 545 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 POLR2FP61218 127 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 UBXN1Q04323 297 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 KDSRQ06136 332 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 RING1Q06587 406 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 EIF4EBP2Q13542 120 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 SYCP1Q15431 976 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 FKBP15Q5T1M5 1219 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 GRAMD4Q6IC98 578 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 TOGARAM2Q6ZUX3 1019 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 NUDT18Q6ZVK8 323 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 UNC45BQ8IWX7 931 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 ALLCQ8N6M5 410 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 AOPEPQ8N6M6 819 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 TERB1Q8NA31 727 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 ANKRD20A12PQ8NF67 263 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 DQX1Q8TE96 717 aaKnown RBP16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 BHMTQ93088 406 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 SLC39A13Q96H72 371 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 ERGIC2Q96RQ1 377 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 EPC1Q9H2F5 836 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 EBF1Q9UH73 591 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 CLEC4EQ9ULY5 219 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 MMP17Q9ULZ9 603 aa16.82■□□□□ 0.28
PDLIM5-216ENST00000511767 GVINP1Q7Z2Y8 2422 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 SMTNL1A8MU46 457 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 F8VZ95 297 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 SGK1O00141 431 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 ADAM23O75077 832 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 LATS1O95835 1130 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 GLI1P08151 1106 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 HNRNPLP14866 589 aaKnown RBP eCLIP16.81■□□□□ 0.285e-8■■■□□ 14.7
PDLIM5-216ENST00000511767 JAM2P57087 298 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 SRSF5Q13243 272 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 IQCB1Q15051 598 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 CRY1Q16526 586 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 HSF5Q4G112 596 aaPredicted RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 TMEM92Q6UXU6 159 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 NOP9Q86U38 636 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 TXNDC5Q8NBS9 432 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 C1orf131Q8NDD1 294 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 ACDQ96AP0 544 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 FAM149B1Q96BN6 582 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 TMA16Q96EY4 203 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 PIWIL1Q96J94 861 aaKnown RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 FCRL2Q96LA5 508 aaPredicted RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 POPDC2Q9HBU9 364 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 FAM207AQ9NSI2 230 aaPredicted RBP16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 SLC27A6Q9Y2P4 619 aa16.81■□□□□ 0.28
PDLIM5-216ENST00000511767 GOLGA6L7A0A1B0GV03 622 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 TSPAN3O60637 253 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 KLF8O95600 359 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 ERBB2P04626 1255 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 DGKGP49619 791 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 ZNF165P49910 485 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 SLC6A3Q01959 620 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 MPPE1Q53F39 396 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 EFHC1Q5JVL4 640 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 OR6B2Q6IFH4 312 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 DEFB106AQ8N104 65 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 TMEM35BQ8NCS4 154 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 DDI1Q8WTU0 396 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 NOX5Q96PH1 765 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 HHIPQ96QV1 700 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 SLC2A11Q9BYW1 496 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 ZDHHC4Q9NPG8 344 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 NLRC4Q9NPP4 1024 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 ASNSD1Q9NWL6 643 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 TLR6Q9Y2C9 796 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 DAAM1Q9Y4D1 1078 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 ZNF292O60281 2723 aa16.8■□□□□ 0.28
PDLIM5-216ENST00000511767 CAPN9O14815 690 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 AXIN1O15169 862 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 TEX33O43247 280 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 ACSL4O60488 711 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 GFPT2O94808 682 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 APBB3O95704 486 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 TRUB2O95900 331 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 IGLV3-25P01717 112 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 CYBBP04839 570 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 CHRNB2P17787 502 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 SOX5P35711 763 aa16.79■□□□□ 0.28
PDLIM5-216ENST00000511767 GABRB2P47870 512 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms