RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 GHRP10912 638 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 CXCR2P25025 360 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KLRC1P26715 233 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 HTR1BP28222 390 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SOX6P35712 828 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 TUFMP49411 452 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 SNRPFP62306 86 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 CHRNB3Q05901 458 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 C1DQ13901 141 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 LRRC36Q1X8D7 754 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 RNF44Q7L0R7 432 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 DEFB132Q7Z7B7 95 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SLFN11Q7Z7L1 901 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 TRPC4APQ8TEL6 797 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 TMEM237Q96Q45 408 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 IDI2Q9BXS1 227 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 OSBPL8Q9BZF1 889 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SPRTNQ9H040 489 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 ELL3Q9HB65 397 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 EPB41L4AQ9HCS5 686 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 ATP13A1Q9HD20 1204 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 NPHS2Q9NP85 383 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 GJB4Q9NTQ9 266 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 DRG1Q9Y295 367 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 FAM25AB3EWG3 89 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 FAM25CB3EWG5 89 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 FAM25GB3EWG6 89 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 TMEM114B3SHH9 223 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PDHXO00330 501 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PARNO95453 639 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 ITGB6P18564 788 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 BCAT1P54687 386 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 RHAGQ02094 409 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ITGADQ13349 1161 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SPIDRQ14159 915 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 CYP2A13Q16696 494 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KBTBD12Q3ZCT8 623 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 LLGL2Q6P1M3 1020 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ILDR2Q71H61 639 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 TRAPPC5Q8IUR0 188 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 LINC00116Q8NCU8 138 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ZNF248Q8NDW4 579 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 GLMNQ92990 594 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 FRMD6Q96NE9 622 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SERHL2Q9H4I8 314 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SERHLQ9NQF3 203 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KCNH7Q9NS40 1196 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SUCOQ9UBS9 1254 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 AMACRQ9UHK6 382 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SESN1Q9Y6P5 492 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 RPS6KL1Q9Y6S9 549 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 CNTNAP2Q9UHC6 1331 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 A0A1W2PQC6 194 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PIPSLA2A3N6 862 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PHF20L1A8MW92 1017 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 OGTO15294 1046 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ECDO95905 644 aaPredicted RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 KRT6AP02538 564 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KRT6BP04259 564 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ITIH2P19823 946 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KRT6CP48668 564 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.93□□□□□ -1.46
USP38-203ENST00000511739 MROH9Q5TGP6 573 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 BRSK2Q8IWQ3 736 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SLC35G2Q8TBE7 412 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 FEZF2Q8TBJ5 459 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 REPS1Q96D71 796 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ACOX2Q99424 681 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SH3GL1Q99961 368 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PACSIN1Q9BY11 444 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 DCLK3Q9C098 648 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SLC28A3Q9HAS3 691 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 KIAA1257Q9ULG3 409 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 C1QTNF3-AMACRE9PGA6 284 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 CCNT2O60583 730 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 SERPINF2P08697 491 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 MAPKAPK2P49137 400 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PDX1P52945 283 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PTGISQ16647 500 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PABPC1LQ4VXU2 614 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 ATP6AP1LQ52LC2 224 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ZNF677Q86XU0 584 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 C4orf33Q8N1A6 199 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 FAM71DQ8N9W8 422 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 NEK7Q8TDX7 302 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 C9orf72Q96LT7 481 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PGLYRP2Q96PD5 576 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 OSMRQ99650 979 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 FAM167BQ9BTA0 163 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PI4K2AQ9BTU6 479 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 OSBPL1AQ9BXW6 950 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PPCSQ9HAB8 311 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 ALKBH4Q9NXW9 302 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PSME2Q9UL46 239 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SATB2Q9UPW6 733 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 SH3GLB1Q9Y371 365 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 TPST1O60507 370 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 CNOT3O75175 753 aaKnown RBP5.93□□□□□ -1.46
USP38-203ENST00000511739 SLC25A12O75746 678 aa5.93□□□□□ -1.46
USP38-203ENST00000511739 PSMA4P25789 261 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms