RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 GTF2IRD1Q9UHL9 959 aa18.54■□□□□ 0.56
CCHCR1-228ENST00000509552 FAM237BA0A1B0GVD1 139 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 SNAI1O95863 264 aaPredicted RBP18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 CD4P01730 458 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 ESRRAP11474 423 aaPredicted RBP18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 CNTFP26441 200 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 FDFT1P37268 417 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 NAA25Q14CX7 972 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 MROH9Q5TGP6 573 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 NCBP2-AS2Q69YL0 99 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 TRMT10BQ6PF06 316 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 STRADAQ7RTN6 431 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 HACE1Q8IYU2 909 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 CCDC185Q8N715 623 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 ENDOVQ8N8Q3 282 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 MAB21L3Q8N8X9 362 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 RAB3IL1Q8TBN0 382 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 HSFY1Q96LI6 401 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 ZNF570Q96NI8 536 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 MIPEPQ99797 713 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 FERMT1Q9BQL6 677 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 MECRQ9BV79 373 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 CADM1Q9BY67 442 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 SLC5A4Q9NY91 659 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 DTLQ9NZJ0 730 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 TRIP11Q15643 1979 aa18.53■□□□□ 0.56
CCHCR1-228ENST00000509552 TPBGLP0DKB5 382 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 GM2AP17900 193 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 GNAZP19086 355 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 AMPD1P23109 780 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 CRHR1P34998 444 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 GJA5P36382 358 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 RPL34P49207 117 aaKnown RBP18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 BST1Q10588 318 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 PCBP1Q15365 356 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 CHI3L2Q15782 390 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 DUSP28Q4G0W2 176 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 EFHC1Q5JVL4 640 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 CYS1Q717R9 158 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 CCDC33Q8N5R6 958 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 KCNV2Q8TDN2 545 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 MCUR1Q96AQ8 359 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 ZNF560Q96MR9 790 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 APOL6Q9BWW8 343 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 SIRPGQ9P1W8 387 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 KAT6AQ92794 2004 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 RALGAPA2Q2PPJ7 1873 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 KPNA7A9QM74 516 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 FCHO1O14526 889 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 HCRTO43612 131 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 RECQL4O94761 1208 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 STK10O94804 968 aaKnown RBP18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 SMPD1P17405 629 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 CRYMQ14894 314 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 ALKAL1Q6UXT8 129 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 DENND5BQ6ZUT9 1274 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 DPP9Q86TI2 863 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 MAGEB5Q9BZ81 275 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 DCLRE1BQ9H816 532 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 PRDM16Q9HAZ2 1276 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 RCOR3Q9P2K3 495 aaPredicted RBP18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 MORF4L1Q9UBU8 362 aa18.52■□□□□ 0.56
CCHCR1-228ENST00000509552 A0A0A0MRY4 1105 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 GSC2O15499 205 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 XPOTO43592 962 aaKnown RBP18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 MLNP12872 115 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 HOXD8P13378 290 aaPredicted RBP18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 GOT1P17174 413 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 NBPF20Q3BBV1 942 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 CASC4Q6P4E1 433 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 C4orf50Q6ZRC1 276 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 CRLF3Q8IUI8 442 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 KBTBD7Q8WVZ9 684 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 SLC10A4Q96EP9 437 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 SPATA13Q96N96 652 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 OSMRQ99650 979 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 TRIM56Q9BRZ2 755 aaKnown RBP18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 NXF3Q9H4D5 531 aaKnown RBP18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 PIRO00625 290 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 BIRC5O15392 142 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 ENTPD5O75356 428 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 GPR32O75388 356 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 DGKIO75912 1065 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 LMO2P25791 158 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 PNPLA4P41247 253 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 GRIA1P42261 906 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 MATKP42679 507 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 TAF11Q15544 211 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 FAM91A1Q658Y4 838 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 TIFABQ6ZNK6 161 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 APPL2Q8NEU8 664 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 TTC8Q8TAM2 541 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 SLC2A14Q8TDB8 520 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 CDKL2Q92772 493 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 WWP1Q9H0M0 922 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 MOCS1Q9NZB8 636 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms