RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 MMTAG2Q9BU76 263 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 CARD6Q9BX69 1037 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 NAA15Q9BXJ9 866 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 UPF3BQ9BZI7 483 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TPSD1Q9BZJ3 242 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TM6SF1Q9BZW5 370 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 PDE11AQ9HCR9 933 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 MRPS18AQ9NVS2 196 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 ZNF70Q9UC06 446 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 SERPINB13Q9UIV8 391 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 PADI4Q9UM07 663 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 L1RE1Q9UN81 338 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 EXOC6BQ9Y2D4 811 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 MRFAP1Q9Y605 127 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 CAPN7Q9Y6W3 813 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 PHRF1Q9P1Y6 1649 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 ABCC4O15439 1325 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TTC21AQ8NDW8 1320 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 RGPD3A6NKT7 1758 aaPredicted RBP4.96□□□□□ -1.61
PDLIM5-211ENST00000508531 RGPD4Q7Z3J3 1758 aa4.96□□□□□ -1.61
PDLIM5-211ENST00000508531 ENO4A6NNW6 628 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 F2RL2O00254 374 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 IKBKBO14920 756 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 NPHP1O15259 732 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 EIF3HO15372 352 aaKnown RBP eCLIP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 AP5Z1O43299 807 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 KIF5CO60282 957 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 STX10O60499 249 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 ANXA1P04083 346 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 LPOP22079 712 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 PAX7P23759 505 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CHMLP26374 656 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 NDUFV1P49821 464 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 PSMD7P51665 324 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 NLRP5P59047 1200 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 ROR2Q01974 943 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CKAP4Q07065 602 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 SNAPC2Q13487 334 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CASP8Q14790 479 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 NAA25Q14CX7 972 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 IQCB1Q15051 598 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 PCBP2Q15366 365 aaKnown RBP eCLIP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC96Q2M329 555 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 TMEM119Q4V9L6 283 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 KHDC1Q4VXA5 237 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 ARFGAP2Q8N6H7 521 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 ANKRD44Q8N8A2 993 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 TRIM58Q8NG06 486 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 SNRNP27Q8WVK2 155 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 RUFY2Q8WXA3 655 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 SCAMP4Q969E2 229 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CAPS2Q9BXY5 557 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 SMOC2Q9H3U7 446 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 BICC1Q9H694 974 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 VCPKMTQ9H867 229 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 TRMT1Q9NXH9 659 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 RGL1Q9NZL6 768 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 HOOK1Q9UJC3 728 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 TRHDEQ9UKU6 1024 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CORO1CQ9ULV4 474 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 TRPM3Q9HCF6 1732 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CRB1P82279 1406 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 ALS2Q96Q42 1657 aa4.96□□□□□ -1.62
PDLIM5-211ENST00000508531 CTAGE15A4D2H0 777 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 GOLGA6CA6NDK9 693 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF785A8K8V0 405 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 KRTAP29-1A8MX34 341 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CAND2O75155 1236 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC175P0C221 793 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 EBLN1P0CF75 366 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 GOLGA6DP0CG33 693 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CTAGE8P0CG41 777 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 ITGB6P18564 788 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CHRM3P20309 590 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 MALP21145 153 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 PSMA5P28066 241 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 GCLCP48506 637 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CCT8P50990 548 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 GNG11P61952 73 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 TFF2Q03403 129 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 EXOSC9Q06265 439 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 UAP1L1Q3KQV9 507 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 AMOTQ4VCS5 1084 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 LRRC23Q53EV4 343 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 SYDE2Q5VT97 1194 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 KIAA1614Q5VZ46 1190 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CAPRIN2Q6IMN6 1127 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 SLC4A10Q6U841 1118 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 RINLQ6ZS11 566 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 SPATA21Q7Z572 469 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CTAGE6Q86UF2 777 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 TRIM74Q86UV6 250 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 TRIM73Q86UV7 250 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CTAGE4Q8IX94 777 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 RNF168Q8IYW5 571 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 VGLL2Q8N8G2 317 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 C1orf131Q8NDD1 294 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 BCAS4Q8TDM0 211 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 NSUN6Q8TEA1 469 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms