RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SLC22A2O15244 555 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 GAS2O43903 313 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRPSAP2O60256 369 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 GLRA3O75311 464 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 LRCH4O75427 683 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TMEM63AO94886 807 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TRUB2O95900 331 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZBED1O96006 694 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCNE2O96020 404 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TNNC2P02585 160 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 APOEP02649 317 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SERPINE1P05121 402 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 BPGMP07738 259 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 P4HA1P13674 534 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CPA3P15088 417 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TAL1P17542 331 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 EIF2AK2P19525 551 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TPSB2P20231 275 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 MX2P20592 715 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 AMPD1P23109 780 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SERPINB6P35237 376 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 GARSP41250 739 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 RPL5P46777 297 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 VEGFBP49765 207 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CHN2P52757 468 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ALDH18A1P54886 795 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 INHBEP58166 350 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NLRP11P59045 1033 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 MYL6P60660 151 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PSMC1P62191 440 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 DYNLT1P63172 113 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 JAG1P78504 1218 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 MRPS9P82933 396 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRKCEQ02156 737 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF252P-AS1Q0IIN9 211 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 KRT81Q14533 505 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NOMO1Q15155 1222 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TPSAB1Q15661 275 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF699Q32M78 642 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 MMEL1Q495T6 779 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ANKRD20A4Q4UJ75 823 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ATP13A4Q4VNC1 1196 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TEX44Q53QW1 395 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 BOLA3Q53S33 107 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 C2CD6Q53TS8 623 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 RARS2Q5T160 578 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 METTL21CQ5VZV1 264 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SPOPLQ6IQ16 392 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 LLGL2Q6P1M3 1020 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 KLC3Q6P597 504 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 C16orf89Q6UX73 402 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 B3GNT6Q6ZMB0 384 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ILDR2Q71H61 639 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SETD3Q86TU7 594 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM83AQ86UY5 434 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ALYREFQ86V81 257 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NCAPG2Q86XI2 1143 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 UNC45BQ8IWX7 931 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 RTKN2Q8IZC4 609 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NDUFAF2Q8N183 169 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM71DQ8N9W8 422 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 FLAD1Q8NFF5 587 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 IL31RAQ8NI17 732 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PIWIL2Q8TC59 973 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SPATA18Q8TC71 538 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NSUN6Q8TEA1 469 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 GDPD5Q8WTR4 605 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NAT14Q8WUY8 206 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 STON2Q8WXE9 905 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC7A3Q8WY07 619 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 USP6NLQ92738 828 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CFAP36Q96G28 342 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ANKRD36BP1Q96IX9 119 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PANX3Q96QZ0 392 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TUBGCP5Q96RT8 1024 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 INSM2Q96T92 566 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TBCBQ99426 244 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 TTC1Q99614 292 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PDCD2LQ9BRP1 358 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CNPY3Q9BT09 278 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 HAUS8Q9BT25 410 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 NAT9Q9BTE0 207 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 KIFC3Q9BVG8 833 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CALN1Q9BXU9 219 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 MRPL4Q9BYD3 311 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 MRPS26Q9BYN8 205 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PORCNQ9H237 461 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 VPS33BQ9H267 617 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PIDD1Q9HB75 910 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 APOBEC3GQ9HC16 384 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 JPH1Q9HDC5 661 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 MRPL40Q9NQ50 206 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARHGEF4Q9NR80 690 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 RAB6BQ9NRW1 208 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CISHQ9NSE2 258 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 CHCHD3Q9NX63 227 aaKnown RBP5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARMCX1Q9P291 453 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 DCDC2Q9UHG0 476 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC7A8Q9UHI5 535 aa5.13□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRPF19Q9UMS4 504 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms