RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 IFNAR2P48551 515 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 TMED2Q15363 201 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 SLC39A12Q504Y0 691 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 NOMO2Q5JPE7 1267 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 DCLRE1AQ6PJP8 1040 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 CENPUQ71F23 418 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 GPR152Q8TDT2 470 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 FRMD8P1Q9BZ68 369 aaPredicted RBP12.64□□□□□ -0.39
LIN54-206ENST00000506560 CNGB3Q9NQW8 809 aa12.64□□□□□ -0.39
LIN54-206ENST00000506560 EXOC1LA0A1B0GW35 172 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 SOAT2O75908 522 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 STIP1P31948 543 aaKnown RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 YWHAHQ04917 246 aaPredicted RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 RNASELQ05823 741 aaKnown RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 BSPRYQ5W0U4 402 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 TAC4Q86UU9 113 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 TMEM173Q86WV6 379 aaPredicted RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 METTL23Q86XA0 190 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 SRRM1Q8IYB3 904 aaKnown RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 SERPINB12Q96P63 405 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 ROPN1BQ9BZX4 212 aaPredicted RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.63□□□□□ -0.39
LIN54-206ENST00000506560 TSPYL1Q9H0U9 437 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 ROPN1Q9HAT0 212 aaPredicted RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.63□□□□□ -0.39
LIN54-206ENST00000506560 STAP1Q9ULZ2 295 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 MSI1O43347 362 aaKnown RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 PQBP1O60828 265 aaKnown RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 APRTP07741 180 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 DESP17661 470 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 ADRA1BP35368 520 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 ELK3P41970 407 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 OLIG2Q13516 323 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 CEP57Q86XR8 500 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 FAM126BQ8IXS8 530 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 ARFGAP2Q8N6H7 521 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 NPWQ8N729 165 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 SLAIN1Q8ND83 568 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 ATXN2LQ8WWM7 1075 aaKnown RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 DEFB118Q96PH6 123 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 EPN3Q9H201 632 aa12.63□□□□□ -0.39
LIN54-206ENST00000506560 ABI2Q9NYB9 513 aaPredicted RBP12.63□□□□□ -0.39
LIN54-206ENST00000506560 BCLAF3A2AJT9 711 aaKnown RBP12.62□□□□□ -0.39
LIN54-206ENST00000506560 NDUFAB1O14561 156 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 ARL4AP40617 200 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 ARL4CP56559 192 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 FAM189BP81408 668 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 NLRP14Q86W24 1093 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 SCN4BQ8IWT1 228 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 PYROXD1Q8WU10 500 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 OLFM3Q96PB7 478 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 CCT8L2Q96SF2 557 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 GPR62Q9BZJ7 368 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 DNAI2Q9GZS0 605 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 TMEM120BA0PK00 339 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 MYO1CO00159 1063 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 ENPP3O14638 875 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 SELPP16109 830 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 CDK7P50613 346 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 SLC5A3P53794 718 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 CCL23P55773 120 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
LIN54-206ENST00000506560 DDR2Q16832 855 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 SLC45A4Q5BKX6 768 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 C3orf62Q6ZUJ4 267 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 C10orf67Q8IYJ2 551 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 RTP4Q96DX8 246 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 PRMT1Q99873 361 aaKnown RBP12.62□□□□□ -0.39
LIN54-206ENST00000506560 PLAC1Q9HBJ0 212 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 DMAP1Q9NPF5 467 aaPredicted RBP12.62□□□□□ -0.39
LIN54-206ENST00000506560 SFMBT1Q9UHJ3 866 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 ZMYND8Q9ULU4 1186 aaPredicted RBP12.62□□□□□ -0.39
LIN54-206ENST00000506560 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 SQORQ9Y6N5 450 aa12.62□□□□□ -0.39
LIN54-206ENST00000506560 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
LIN54-206ENST00000506560 A0A087WUV0 522 aaPredicted RBP12.61□□□□□ -0.39
LIN54-206ENST00000506560 E7ESA3 106 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 INPPL1O15357 1258 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 TRAPPC3O43617 180 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 FBXO21O94952 628 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 GRIK1P39086 918 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 DPYSQ14117 519 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 SMAD1Q15797 465 aaKnown RBP12.61□□□□□ -0.39
LIN54-206ENST00000506560 RFX8Q6ZV50 586 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 ZNF534Q76KX8 674 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
LIN54-206ENST00000506560 MPP5Q8N3R9 675 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 ATAD1Q8NBU5 361 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 FBF1Q8TES7 1133 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 MAML1Q92585 1016 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 XPO6Q96QU8 1125 aaKnown RBP12.61□□□□□ -0.39
LIN54-206ENST00000506560 COLEC11Q9BWP8 271 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 TKTL2Q9H0I9 626 aa12.61□□□□□ -0.39
LIN54-206ENST00000506560 PRDM12Q9H4Q4 367 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms