RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 MYO18AQ92614 2054 aaKnown RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 ABHD14A-ACY1A0A1B0GW23 586 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 GOLGA6L10A6NI86 522 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 HACD1B0YJ81 288 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 H7C0C1 242 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 POLR3GO15318 223 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 TP73O15350 636 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 TBC1D4O60343 1298 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 EFCAB14O75071 495 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 RNF40O75150 1001 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 NUDT17P0C025 328 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 NCAM1P13591 858 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 RAG1P15918 1043 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 PECAM1P16284 738 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 ACTN2P35609 894 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 ATP5OP48047 213 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 CXCR3P49682 368 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 VPS41P49754 854 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 GATMP50440 423 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 RABGGTBP53611 331 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 SLC5A3P53794 718 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 GPS1Q13098 491 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 GPR17Q13304 367 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 P3H1Q32P28 736 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 PPP6R3Q5H9R7 873 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 EFHC2Q5JST6 749 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 CEP85LQ5SZL2 805 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 AGBL2Q5U5Z8 902 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 BTBD8Q5XKL5 378 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 DARS2Q6PI48 645 aaKnown RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 C1orf228Q6PIY5 440 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 ANKS3Q6ZW76 656 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 PDZD4Q76G19 769 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 DEFB128Q7Z7B8 93 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 FAM131BQ86XD5 332 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 CEP57Q86XR8 500 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 CDKL3Q8IVW4 592 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 SCN4BQ8IWT1 228 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 UNC45BQ8IWX7 931 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 NUP93Q8N1F7 819 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 ARHGAP18Q8N392 663 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 CCDC185Q8N715 623 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 SPPL2BQ8TCT7 592 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 RTP4Q96DX8 246 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 CSPG4P5Q96PW8 444 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 TMEM121Q9BTD3 319 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 TMEM109Q9BVC6 243 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 RHOBTB2Q9BYZ6 727 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 GPR62Q9BZJ7 368 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 PHACTR1Q9C0D0 580 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 ADAM7Q9H2U9 754 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 TMBIM4Q9HC24 238 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 WDR6Q9NNW5 1121 aaKnown RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 AAASQ9NRG9 546 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 IL37Q9NZH6 218 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 CWC15Q9P013 229 aaKnown RBP8.35□□□□□ -1.07
COL4A5-208ENST00000505728 RAD54BQ9Y620 910 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 PATJQ8NI35 1801 aa8.35□□□□□ -1.07
COL4A5-208ENST00000505728 ZNF638Q14966 1978 aaKnown RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 HMGB1P1B2RPK0 211 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 EEF2KO00418 725 aaKnown RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 EIF3HO15372 352 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 DGKIO75912 1065 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 RTN3O95197 1032 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 EFEMP2O95967 443 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 TIMP1P01033 207 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 IFNB1P01574 187 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 AMHP03971 560 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 OR4Q2P0C623 313 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 ZSCAN5DPP0CG00 497 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 ETS1P14921 441 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 AMPD1P23109 780 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 ALDH7A1P49419 539 aaKnown RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 YWHAGP61981 247 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 PITX1P78337 314 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 FPGSQ05932 587 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 NME3Q13232 169 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 EIF4EBP2Q13542 120 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 BRMS1LQ5PSV4 323 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 RNASEH2BQ5TBB1 312 aaKnown RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 DENND2CQ68D51 928 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 NPNTQ6UXI9 565 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 C16orf59Q7L2K0 433 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 HOOK3Q86VS8 718 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 MON1AQ86VX9 555 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 PPIL6Q8IXY8 311 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 ZCCHC9Q8N567 271 aaKnown RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 GLIS1Q8NBF1 620 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 SCAMP5Q8TAC9 235 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 RNF139Q8WU17 664 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 RIN2Q8WYP3 895 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 TOP1MTQ969P6 601 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 SPATA17Q96L03 361 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 CEP295NLQ96MC4 621 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 TTPALQ9BTX7 342 aa8.34□□□□□ -1.07
COL4A5-208ENST00000505728 ROPN1BQ9BZX4 212 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-208ENST00000505728 OSBPL2Q9H1P3 480 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms