RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 FAM129AQ9BZQ8 928 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 ZBP1Q9H171 429 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 PCDH18Q9HCL0 1135 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 EPB41L5Q9HCM4 733 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 WDR6Q9NNW5 1121 aaKnown RBP10.54□□□□□ -0.72
DDX41-203ENST00000504781 FAM114A2Q9NRY5 505 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.54□□□□□ -0.72
DDX41-203ENST00000504781 DDIT4Q9NX09 232 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 DMGDHQ9UI17 866 aaKnown RBP10.54□□□□□ -0.72
DDX41-203ENST00000504781 ASB3Q9Y575 518 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
DDX41-203ENST00000504781 APOC4-APOC2K7ER74 178 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 C2CD2LO14523 706 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ZNF189O75820 626 aaPredicted RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 ARHGEF15O94989 841 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 APOC2P02655 101 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ITGAVP06756 1048 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ZDHHC11BP0C7U3 371 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 TGM2P21980 687 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 CCR1P32246 355 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 HTR7P34969 479 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ARL4AP40617 200 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 CDR1P51861 262 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 SLC7A5Q01650 507 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 TAF10Q12962 218 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 NME3Q13232 169 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 NNTQ13423 1086 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 CUL1Q13616 776 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 PPP2R5DQ14738 602 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 PABPC1LQ4VXU2 614 aaKnown RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 RAB6CQ53S08 254 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 EFHC2Q5JST6 749 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 KAZNQ674X7 775 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 LILRA6Q6PI73 481 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 TMC7Q7Z402 723 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ANKS1BQ7Z6G8 1248 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 RFX6Q8HWS3 928 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 CCHCR1Q8TD31 782 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 HDAC7Q8WUI4 952 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 EDEM1Q92611 657 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 P3H4Q92791 437 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 NKD2Q969F2 451 aaPredicted RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 FBXO32Q969P5 355 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 TRMT2BQ96GJ1 504 aaKnown RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 C1orf74Q96LT6 269 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 SEPT5Q99719 369 aaPredicted RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 EMILIN2Q9BXX0 1053 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 RAB6CQ9H0N0 254 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 EPC1Q9H2F5 836 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 CRISPLD1Q9H336 500 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 SMOC2Q9H3U7 446 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 DHX35Q9H5Z1 703 aaKnown RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 ARFGAP3Q9NP61 516 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 PIGVQ9NUD9 493 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 ARHGEF38Q9NXL2 777 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 UXTQ9UBK9 157 aaPredicted RBP10.53□□□□□ -0.72
DDX41-203ENST00000504781 SLC12A6Q9UHW9 1150 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 AP4E1Q9UPM8 1137 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 TLR6Q9Y2C9 796 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 PATJQ8NI35 1801 aa10.53□□□□□ -0.72
DDX41-203ENST00000504781 A0A1W2PQH9 124 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 LCHNA4D1U4 455 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 EPOPA6NHQ4 379 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 H3BRJ5 948 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 NDC80O14777 642 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 TEX28O15482 410 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 LIASO43766 372 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 HEXIM1O94992 359 aaKnown RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 SEC24AO95486 1093 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 ECEL1O95672 775 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 GAS8O95995 478 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 CD48P09326 243 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 RPL17P18621 184 aaKnown RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 ITIH2P19823 946 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 GPR15P49685 360 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 EPHB3P54753 998 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 GUCY2DQ02846 1103 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 PLD1Q13393 1074 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 XRCC4Q13426 336 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 BYSLQ13895 437 aaKnown RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 VEPH1Q14D04 833 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 ZC3H12AQ5D1E8 599 aaKnown RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 OTUD1Q5VV17 481 aaPredicted RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 DUPD1Q68J44 220 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 SLC9A4Q6AI14 798 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 KLHDC10Q6PID8 442 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 TMCO3Q6UWJ1 677 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 CCDC149Q6ZUS6 474 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 PDZD4Q76G19 769 aaPredicted RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 ITIH5Q86UX2 942 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 FAM131BQ86XD5 332 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 TTC9BQ8N6N2 239 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 PLD5Q8N7P1 536 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 BBOF1Q8ND07 529 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 STKLD1Q8NE28 680 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 SLC35B2Q8TB61 432 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 SPPL3Q8TCT6 385 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms