RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CNGB3Q9NQW8 809 aa20.33■□□□□ 0.85
UBE2D3-215ENST00000503418 ABCC13Q9NSE7 274 aa20.33■□□□□ 0.85
UBE2D3-215ENST00000503418 CACNA2D2Q9NY47 1150 aa20.33■□□□□ 0.85
UBE2D3-215ENST00000503418 MBD1Q9UIS9 605 aaPredicted RBP20.33■□□□□ 0.85
UBE2D3-215ENST00000503418 FBXO10Q9UK96 956 aa20.33■□□□□ 0.85
UBE2D3-215ENST00000503418 RAD54BQ9Y620 910 aa20.33■□□□□ 0.85
UBE2D3-215ENST00000503418 CEP192Q8TEP8 1941 aa20.33■□□□□ 0.84
UBE2D3-215ENST00000503418 FGFR1OPO95684 399 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 HARS2P49590 506 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 MFAP3P55082 362 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 DAOAP59103 153 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 UBE2HP62256 183 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 GCNT1Q02742 428 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 STILQ15468 1287 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 TRIP4Q15650 581 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 CNGA2Q16280 664 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 KIAA1211LQ6NV74 962 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 PMF1Q6P1K2 205 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 CREBRFQ8IUR6 639 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 CPXM2Q8N436 756 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 TRIML1Q8N9V2 468 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 IPO4Q8TEX9 1081 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 DDI1Q8WTU0 396 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 DDX1Q92499 740 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 GABRG3Q99928 467 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 ZSWIM1Q9BR11 485 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 INTS2Q9H0H0 1204 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 CALCOCO1Q9P1Z2 691 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 KIAA1468Q9P260 1216 aa20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 TNRC6BQ9UPQ9 1833 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-215ENST00000503418 PATE3B3GLJ2 98 aa20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 KHNYNO15037 678 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 MSI1O43347 362 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 NDUFV2P19404 249 aa20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 MARSP56192 900 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 GEN1Q17RS7 908 aa20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 SLC35F5Q8WV83 523 aa20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 SLC27A6Q9Y2P4 619 aa20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 HBS1LQ9Y450 684 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 NCOR2Q9Y618 2525 aa20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 LAMA1P25391 3075 aa20.31■□□□□ 0.84
UBE2D3-215ENST00000503418 LNP1A1A4G5 178 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 WASH3PC4AMC7 463 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 TSPAN3O60637 253 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 KRT5P13647 590 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 PTGER3P43115 390 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 ANKS1BQ7Z6G8 1248 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 SCML4Q8N228 414 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 CLEC4CQ8WTT0 213 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 KREMEN1Q96MU8 473 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 CLEC4EQ9ULY5 219 aa20.3■□□□□ 0.84
UBE2D3-215ENST00000503418 ATXN2Q99700 1313 aaKnown RBP20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 GFRA2O00451 464 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 AP5Z1O43299 807 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 GABBR2O75899 941 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 LTFP02788 710 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 ZNF132P52740 706 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 RPL6Q02878 288 aaKnown RBP20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 LYSMD4Q5XG99 296 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 FAM217AQ8IXS0 508 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 DEFB119Q8N690 84 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 UCMAQ8WVF2 138 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 IRGQQ8WZA9 623 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 GOLGA1Q92805 767 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 PIWIL1Q96J94 861 aaKnown RBP20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 MIS12Q9H081 205 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 SLC6A17Q9H1V8 727 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 CD248Q9HCU0 757 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 UBE2TQ9NPD8 197 aaPredicted RBP20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 RWDD2AQ9UIY3 292 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 CYP8B1Q9UNU6 501 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 STON1Q9Y6Q2 735 aa20.29■□□□□ 0.84
UBE2D3-215ENST00000503418 ADRB1P08588 477 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 STARD3Q14849 445 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 MPPE1Q53F39 396 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 KIAA1324Q6UXG2 1013 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 SLC36A4Q6YBV0 504 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 HSFY1Q96LI6 401 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 CRACR2AQ9BSW2 395 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 CIPCQ9C0C6 399 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 ST7Q9NRC1 585 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 CHMP5Q9NZZ3 219 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 GON4LQ3T8J9 2241 aa20.28■□□□□ 0.84
UBE2D3-215ENST00000503418 IGHV1OR15-9A0A0B4J2B8 117 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 C4orf47A7E2U8 309 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 ZNF217O75362 1048 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 FBXO21O94952 628 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 HOXD9P28356 352 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 IL12RB1P42701 662 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 TRIM61Q5EBN2 209 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 SPDYCQ5MJ68 293 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 MSANTD2Q6P1R3 559 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 SYT12Q8IV01 421 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 MRGPRX1Q96LB2 322 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 SLC2A11Q9BYW1 496 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 TMEM74BQ9NUR3 256 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 THAP10Q9P2Z0 257 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 PI4KAP42356 2102 aa20.27■□□□□ 0.84
UBE2D3-215ENST00000503418 TM4SF5O14894 197 aa20.26■□□□□ 0.83
UBE2D3-215ENST00000503418 NPC1O15118 1278 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms