RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 CD4P01730 458 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 FDX1P10109 184 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 H2AFXP16104 143 aaPredicted RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 TGM2P21980 687 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 PTGER2P43116 358 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 UBE2Q1Q7Z7E8 422 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 PLCZ1Q86YW0 608 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 ZNF655Q8N720 491 aaPredicted RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 CKAP2Q8WWK9 683 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 REEP1Q9H902 201 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 HOXC10Q9NYD6 342 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 CLASP1Q7Z460 1538 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 SLC25A12O75746 678 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 CDH3P22223 829 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 SLC6A15Q9H2J7 730 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 SUCOQ9UBS9 1254 aaKnown RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 CARD8Q9Y2G2 431 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 LEMD3Q9Y2U8 911 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 SNAP91O60641 907 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 MOCS2O96007 188 aaPredicted RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 P4HBP07237 508 aaKnown RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 GARTP22102 1010 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 FGFR4P22455 802 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 FAPQ12884 760 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 CHI3L2Q15782 390 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 MCOLN3Q8TDD5 553 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 ASB2Q96Q27 587 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 RBAKQ9NYW8 714 aaPredicted RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 DNAJC5BQ9UF47 199 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 ENTPD4Q9Y227 616 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 TMEM120BA0PK00 339 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 STK4Q13043 487 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 PLET1Q6UQ28 207 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 PNKPQ96T60 521 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 CNPPD1Q9BV87 410 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 NUDT5Q9UKK9 219 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 TBC1D24Q9ULP9 559 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 NCKAP1Q9Y2A7 1128 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 R3HDM2Q9Y2K5 976 aaKnown RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 RHOBTB3O94955 611 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 CYB5AP00167 134 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 RPL3P39023 403 aaKnown RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 ARPC4P59998 168 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 PLD1Q13393 1074 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 PLCL1Q15111 1095 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 AADACL4Q5VUY2 407 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 SPPL2AQ8TCT8 520 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 GPRASP2Q96D09 838 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 AGAP3Q96P47 875 aa11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 TTYH1Q9H313 450 aaPredicted RBP11.47□□□□□ -0.57
AC055713.1-201ENST00000498967 MYH7P12883 1935 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 LOC100506127A0A0U1RQW1 187 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 FGAP02671 866 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 ITGB6P18564 788 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 PPP1R10Q96QC0 940 aaKnown RBP11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 DDX47Q9H0S4 455 aaKnown RBP11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 PHF20L1A8MW92 1017 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 TPBGLP0DKB5 382 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 ITGA2P17301 1181 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 MAGEA4P43358 317 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 SLC15A2Q16348 729 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 KCNB2Q92953 911 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 AAASQ9NRG9 546 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 SNX8Q9Y5X2 465 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 CLOCKO15516 846 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 CYP17A1P05093 508 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 ZCCHC18P0CG32 403 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 THRBP10828 461 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 STIP1P31948 543 aaKnown RBP11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 ZNHIT3Q15649 155 aaPredicted RBP11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 RBM43Q6ZSC3 357 aaKnown RBP11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 FRMD5Q7Z6J6 570 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 THNSL1Q8IYQ7 743 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 PM20D2Q8IYS1 436 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 NMRK2Q9NPI5 230 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 MED11Q9P086 117 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 CLIC4Q9Y696 253 aa11.46□□□□□ -0.57
AC055713.1-201ENST00000498967 C2orf71A6NGG8 1288 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 PRR29P0C7W0 189 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 ARFIP1P53367 373 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 PGS1Q32NB8 556 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 FAM83BQ5T0W9 1011 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 AKAP14Q86UN6 197 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 ZNF615Q8N8J6 731 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 TNFAIP8L1Q8WVP5 186 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 ORAI2Q96SN7 254 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 BHMT2Q9H2M3 363 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 PYCARDQ9ULZ3 195 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 CYP7B1O75881 506 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 SUPT7LO94864 414 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 SEC24AO95486 1093 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 CRTAMO95727 393 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 LRRC41Q15345 812 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 GXYLT1Q4G148 440 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 SAMD4BQ5PRF9 694 aaKnown RBP11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 PHF20Q9BVI0 1012 aa11.46□□□□□ -0.58
AC055713.1-201ENST00000498967 CINPQ9BW66 212 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms