RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 TNFRSF8P28908 595 aa8□□□□□ -1.13
CDC42-205ENST00000498236 CHRNA3P32297 505 aa8□□□□□ -1.13
CDC42-205ENST00000498236 FLT3P36888 993 aa8□□□□□ -1.13
CDC42-205ENST00000498236 CETN2P41208 172 aa8□□□□□ -1.13
CDC42-205ENST00000498236 SLC11A1P49279 550 aa8□□□□□ -1.13
CDC42-205ENST00000498236 MRPS5P82675 430 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 ADCY1Q08828 1119 aa8□□□□□ -1.13
CDC42-205ENST00000498236 SMARCB1Q12824 385 aa8□□□□□ -1.13
CDC42-205ENST00000498236 KLF1Q13351 362 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 NFE2Q16621 373 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 TAZQ16635 292 aa8□□□□□ -1.13
CDC42-205ENST00000498236 HADHQ16836 314 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 LONRF2Q1L5Z9 754 aa8□□□□□ -1.13
CDC42-205ENST00000498236 CCDC14Q49A88 953 aa8□□□□□ -1.13
CDC42-205ENST00000498236 PAN2Q504Q3 1202 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 COL13A1Q5TAT6 717 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 ZNF468Q5VIY5 522 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 TRNP1Q6NT89 227 aa8□□□□□ -1.13
CDC42-205ENST00000498236 C8orf74Q6P047 294 aa8□□□□□ -1.13
CDC42-205ENST00000498236 C4orf50Q6ZRC1 276 aa8□□□□□ -1.13
CDC42-205ENST00000498236 BEND5Q7L4P6 421 aa8□□□□□ -1.13
CDC42-205ENST00000498236 DEFB128Q7Z7B8 93 aa8□□□□□ -1.13
CDC42-205ENST00000498236 VSIG1Q86XK7 387 aa8□□□□□ -1.13
CDC42-205ENST00000498236 DCP1BQ8IZD4 617 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 TMEM199Q8N511 208 aa8□□□□□ -1.13
CDC42-205ENST00000498236 ARFGAP1Q8N6T3 406 aa8□□□□□ -1.13
CDC42-205ENST00000498236 EMC1Q8N766 993 aa8□□□□□ -1.13
CDC42-205ENST00000498236 EIF1ADQ8N9N8 165 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 ZMIZ2Q8NF64 920 aa8□□□□□ -1.13
CDC42-205ENST00000498236 CMASQ8NFW8 434 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 HASPINQ8TF76 798 aa8□□□□□ -1.13
CDC42-205ENST00000498236 RXFP2Q8WXD0 754 aa8□□□□□ -1.13
CDC42-205ENST00000498236 IRGQQ8WZA9 623 aa8□□□□□ -1.13
CDC42-205ENST00000498236 TOP1MTQ969P6 601 aa8□□□□□ -1.13
CDC42-205ENST00000498236 NT5C3BQ969T7 300 aa8□□□□□ -1.13
CDC42-205ENST00000498236 MYLPFQ96A32 169 aa8□□□□□ -1.13
CDC42-205ENST00000498236 TRIM43Q96BQ3 446 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 ZNF689Q96CS4 500 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 FUBP3Q96I24 572 aaKnown RBP eCLIP8□□□□□ -1.13
CDC42-205ENST00000498236 PIWIL1Q96J94 861 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 RUNDC3BQ96NL0 473 aa8□□□□□ -1.13
CDC42-205ENST00000498236 PNKPQ96T60 521 aa8□□□□□ -1.13
CDC42-205ENST00000498236 TBCBQ99426 244 aa8□□□□□ -1.13
CDC42-205ENST00000498236 MED10Q9BTT4 135 aa8□□□□□ -1.13
CDC42-205ENST00000498236 DDX23Q9BUQ8 820 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 RC3H2Q9HBD1 1191 aaKnown RBP8□□□□□ -1.13
CDC42-205ENST00000498236 LRRC4Q9HBW1 653 aa8□□□□□ -1.13
CDC42-205ENST00000498236 PRDM10Q9NQV6 1147 aa8□□□□□ -1.13
CDC42-205ENST00000498236 CNGB3Q9NQW8 809 aa8□□□□□ -1.13
CDC42-205ENST00000498236 HOMER3Q9NSC5 361 aa8□□□□□ -1.13
CDC42-205ENST00000498236 ARGLU1Q9NWB6 273 aaPredicted RBP8□□□□□ -1.13
CDC42-205ENST00000498236 MARCH5Q9NX47 278 aa8□□□□□ -1.13
CDC42-205ENST00000498236 MTUS1Q9ULD2 1270 aa8□□□□□ -1.13
CDC42-205ENST00000498236 FAN1Q9Y2M0 1017 aa8□□□□□ -1.13
CDC42-205ENST00000498236 COL4A4P53420 1690 aaPredicted RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 COL4A6Q14031 1691 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 C3orf70A6NLC5 250 aaPredicted RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 ZNF487B1APH4 448 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 H7C4K7 107 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 C2CD2LO14523 706 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 TBC1D4O60343 1298 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 PHF2O75151 1096 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 DAB1O75553 588 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 BEST1O76090 585 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 ENDOD1O94919 500 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 AMHP03971 560 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 USP17L7P0C7H9 530 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 RHOXF2BP0C7M4 288 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 MX2P20592 715 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 ITGB8P26012 769 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 SDC4P31431 198 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 MATKP42679 507 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 MAGEA11P43364 429 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 FNTAP49354 379 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 GATMP50440 423 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 BCAR1P56945 870 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 MAP3K7CLP57077 242 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 RNASE9P60153 205 aaKnown RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 YWHAZP63104 245 aaKnown RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 GPLD1P80108 840 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 ADIGQ0VDE8 80 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 SIX1Q15475 284 aaPredicted RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 TAF5Q15542 800 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 PCSK7Q16549 785 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 CCDC142Q17RM4 750 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 BOLA3Q53S33 107 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 PM20D1Q6GTS8 502 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 FBXO38Q6PIJ6 1188 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 VSTM1Q6UX27 236 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.99□□□□□ -1.132e-8■■■■■ 27.9
CDC42-205ENST00000498236 BNIPLQ7Z465 357 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 MAATS1Q7Z4T9 603 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 SYT9Q86SS6 491 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 LRRTM3Q86VH5 581 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 PSTKQ8IV42 348 aaKnown RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 RNF168Q8IYW5 571 aaPredicted RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 SIX6OS1Q8N1H7 587 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 PRELID2Q8N945 189 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 CCDC26Q8TAB7 109 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms