RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 FAM209BQ5JX69 171 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 PRAMEF17Q5VTA0 474 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 IZUMO3Q5VZ72 239 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 TLDC1Q6P9B6 456 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 SERPINA13PQ6UXR4 307 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 USP49Q70CQ1 688 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 SKAP1Q86WV1 359 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 LIX1LQ8IVB5 337 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 FSTL5Q8N475 847 aaPredicted RBP5.59□□□□□ -1.51
SSR3-209ENST00000498205 PNPLA1Q8N8W4 532 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 ACRBPQ8NEB7 543 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 LRRC46Q96FV0 321 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 CCDC17Q96LX7 622 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 CINPQ9BW66 212 aaPredicted RBP5.59□□□□□ -1.51
SSR3-209ENST00000498205 PANK3Q9H999 370 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 TM7SF3Q9NS93 570 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 RXFP3Q9NSD7 469 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 PHTF1Q9UMS5 762 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 SLC27A6Q9Y2P4 619 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 CEP83Q9Y592 693 aa5.59□□□□□ -1.51
SSR3-209ENST00000498205 PPRC1Q5VV67 1664 aaKnown RBP5.59□□□□□ -1.52
SSR3-209ENST00000498205 ERVK-7P63135 1459 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 NEO1Q92859 1461 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 KIDINS220Q9ULH0 1771 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 SPRY2O43597 315 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 EXOC3O60645 756 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 MT-CO3P00414 261 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 TMEM225BP0DP42 221 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 ATICP31939 592 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 RENBPP51606 427 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 TXNL4AP83876 142 aaKnown RBP5.58□□□□□ -1.52
SSR3-209ENST00000498205 LMAN2Q12907 356 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 RNASE12Q5GAN4 147 aaKnown RBP5.58□□□□□ -1.52
SSR3-209ENST00000498205 ARL6IP4Q66PJ3 421 aaKnown RBP5.58□□□□□ -1.52
SSR3-209ENST00000498205 VSTM1Q6UX27 236 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 DPY19L3Q6ZPD9 716 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 CENPQQ7L2Z9 268 aaPredicted RBP5.58□□□□□ -1.52
SSR3-209ENST00000498205 TXLNBQ8N3L3 684 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 NTN5Q8WTR8 489 aaPredicted RBP5.58□□□□□ -1.52
SSR3-209ENST00000498205 RIPOR3Q96MK2 946 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 ASB2Q96Q27 587 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 NECTIN3Q9NQS3 549 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 CA14Q9ULX7 337 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 ZC3H13Q5T200 1668 aaKnown RBP5.58□□□□□ -1.52
SSR3-209ENST00000498205 ABCA6Q8N139 1617 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 HECW2Q9P2P5 1572 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 MED14O60244 1454 aa5.58□□□□□ -1.52
SSR3-209ENST00000498205 NKTRP30414 1462 aaKnown RBP5.58□□□□□ -1.52
SSR3-209ENST00000498205 PIK3C2BO00750 1634 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 MANSC4A6NHS7 340 aaPredicted RBP5.57□□□□□ -1.52
SSR3-209ENST00000498205 H3BNC9 293 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 GCATO75600 419 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 EGR1P18146 543 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 PPP2R1AP30153 589 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 DIO1P49895 249 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 ALDH5A1P51649 535 aaPredicted RBP5.57□□□□□ -1.52
SSR3-209ENST00000498205 CFHR3Q02985 330 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 TFF2Q03403 129 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 FOXF2Q12947 444 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 GPS1Q13098 491 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 ACOX1Q15067 660 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 SLC5A9Q2M3M2 681 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.57□□□□□ -1.52
SSR3-209ENST00000498205 KLHDC7AQ5VTJ3 777 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 RRAGBQ5VZM2 374 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 HIBCHQ6NVY1 386 aaPredicted RBP5.57□□□□□ -1.52
SSR3-209ENST00000498205 CRTC1Q6UUV9 634 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 CLEC9AQ6UXN8 241 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 BCDIN3DQ7Z5W3 292 aaKnown RBP5.57□□□□□ -1.52
SSR3-209ENST00000498205 LINC01465Q8N7H1 131 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.57□□□□□ -1.52
SSR3-209ENST00000498205 SUN3Q8TAQ9 357 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 MMS19Q96T76 1030 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 NLRC4Q9NPP4 1024 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 FRMD4BQ9Y2L6 1034 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 ADGRB1O14514 1584 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 PPLO60437 1756 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 NOS1P29475 1434 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 POGZQ7Z3K3 1410 aa5.57□□□□□ -1.52
SSR3-209ENST00000498205 CGNL1Q0VF96 1302 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 UGGT1Q9NYU2 1555 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 OR2W5A6NFC9 320 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 PRRT4C9JH25 899 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 WDR47O94967 919 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 TUBB4AP04350 444 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 MYL3P08590 195 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 IFIT2P09913 472 aaKnown RBP5.56□□□□□ -1.52
SSR3-209ENST00000498205 IRX6P78412 446 aaPredicted RBP5.56□□□□□ -1.52
SSR3-209ENST00000498205 FAM187BQ17R55 369 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 DGKKQ5KSL6 1271 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 IL31Q6EBC2 164 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 KIAA0408Q6ZU52 694 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 SRRM1Q8IYB3 904 aaKnown RBP5.56□□□□□ -1.52
SSR3-209ENST00000498205 CCDC146Q8IYE0 955 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 FAM186BQ8IYM0 893 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 C12orf76Q8N812 135 aaPredicted RBP5.56□□□□□ -1.52
SSR3-209ENST00000498205 FAM71DQ8N9W8 422 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 DEPTORQ8TB45 409 aa5.56□□□□□ -1.52
SSR3-209ENST00000498205 OVCA2Q8WZ82 227 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms