RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ANKS3Q6ZW76 656 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 NECAB2Q7Z6G3 386 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PRUNE1Q86TP1 453 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 ZC3H18Q86VM9 953 aaKnown RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 CRIPAKQ8N1N5 446 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 TTC9BQ8N6N2 239 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PQLC3Q8N755 202 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PLD5Q8N7P1 536 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 STKLD1Q8NE28 680 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PCDH19Q8TAB3 1148 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SPPL2BQ8TCT7 592 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 DQX1Q8TE96 717 aaKnown RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 NT5C3BQ969T7 300 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 PGAP3Q96FM1 320 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 CSPG4P5Q96PW8 444 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SEPT5Q99719 369 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 TTPALQ9BTX7 342 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 HERC2P3Q9BVR0 1158 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SMOC2Q9H3U7 446 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SAE1Q9UBE0 346 aaPredicted RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 SHOC2Q9UQ13 582 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 DRG1Q9Y295 367 aaKnown RBP8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 NEU2Q9Y3R4 380 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 HEY1Q9Y5J3 304 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 USP3Q9Y6I4 520 aa8.38□□□□□ -1.07
PDZRN3-212ENST00000498048 GOLGA6L10A6NI86 522 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 GOLGA8KD6RF30 607 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 KIAA0355O15063 1070 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 CREB3O43889 395 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 DGKIO75912 1065 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 F9P00740 461 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 TIMP1P01033 207 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 FYNP06241 537 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ETS1P14921 441 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 LAG3P18627 525 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ITIH2P19823 946 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ACTN2P35609 894 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ALDH7A1P49419 539 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 CTCFP49711 727 aaPredicted RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 GDF10P55107 478 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 WDR5P61964 334 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 SMARCB1Q12824 385 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 MRPL58Q14197 206 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ARL13BQ3SXY8 428 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 MGAT5BQ3V5L5 792 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 SDHAF4Q5VUM1 108 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 BSPRYQ5W0U4 402 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 NCBP2-AS2Q69YL0 99 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 PM20D1Q6GTS8 502 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 GPR153Q6NV75 609 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 DARS2Q6PI48 645 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 RHBDF2Q6PJF5 856 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 PRSS55Q6UWB4 352 aaPredicted RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 LRIG3Q6UXM1 1119 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 BEND5Q7L4P6 421 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 CMTR2Q8IYT2 770 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 NUP93Q8N1F7 819 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 PYROXD2Q8N2H3 581 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ARHGAP18Q8N392 663 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 TMEM199Q8N511 208 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 GLIS1Q8NBF1 620 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 SCAMP5Q8TAC9 235 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 C2orf15Q8WU43 125 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 RIN2Q8WYP3 895 aaPredicted RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 TMEM169Q96HH4 297 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 C8orf48Q96LL4 319 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ZNF558Q96NG5 402 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 SLC9A7Q96T83 725 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 EPAS1Q99814 870 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 OXCT2Q9BYC2 517 aaPredicted RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 TXLNGYQ9BZA5 131 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 CDC42EP4Q9H3Q1 356 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 FBXO44Q9H4M3 255 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 CWH43Q9H720 699 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 RC3H2Q9HBD1 1191 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 WDR6Q9NNW5 1121 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ARHGEF4Q9NR80 690 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ABCC13Q9NSE7 274 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 MTMR10Q9NXD2 777 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 VPS18Q9P253 973 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 MTRRQ9UBK8 725 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 ANAPC5Q9UJX4 755 aa8.37□□□□□ -1.07
PDZRN3-212ENST00000498048 A0A1W2PQH9 124 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 CARNS1A5YM72 827 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 TRIM43BA6NCK2 446 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 AGPSO00116 658 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 POLR3GO15318 223 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 KCNN4O15554 427 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 MSI1O43347 362 aaKnown RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 BAIAP3O94812 1187 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 RTN3O95197 1032 aaPredicted RBP8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 MAP3K6O95382 1288 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 IGLV3-25P01717 112 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 URODP06132 367 aa8.36□□□□□ -1.07
PDZRN3-212ENST00000498048 ZSCAN5DPP0CG00 497 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms