RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 GSTCDQ8NEC7 633 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 OR6B3Q8NGW1 331 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 MRRFQ96E11 262 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 DPEP3Q9H4B8 488 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 RXFP1Q9HBX9 757 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 GALNT8Q9NY28 637 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 ATXN10Q9UBB4 475 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 FBXO9Q9UK97 447 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 ST3GAL5Q9UNP4 418 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 SHOC2Q9UQ13 582 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 PATJQ8NI35 1801 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 ATP9BO43861 1147 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 HUS1O60921 280 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 ATP2A2P16615 1042 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 RPL9P32969 192 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 ADCY8P40145 1251 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 PRKCZQ05513 592 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 MORF4L2Q15014 288 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 TRIM71Q2Q1W2 868 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 IZUMO3Q5VZ72 239 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 TWF2Q6IBS0 349 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 CXCL17Q6UXB2 119 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 ASRGL1Q7L266 308 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 BNIPLQ7Z465 357 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 PPP1R13LQ8WUF5 828 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 WNT8BQ93098 351 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 MAK16Q9BXY0 300 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 OXCT2Q9BYC2 517 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 SEZ6LQ9BYH1 1024 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 KLHL14Q9P2G3 628 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 PRKAG3Q9UGI9 489 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 TMCO1Q9UM00 188 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 NAALADL1Q9UQQ1 740 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 TMED5Q9Y3A6 229 aa11.99□□□□□ -0.49
SNRNP200-208ENST00000497539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PDGFRAP16234 1089 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 TARSP26639 723 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 ATP11AP98196 1134 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 NOGQ13253 232 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 TAF11Q15544 211 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PCGF5Q86SE9 256 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 OSTM1Q86WC4 334 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PPP1R14BQ96C90 147 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 ZIC5Q96T25 663 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 APOL6Q9BWW8 343 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PITPNM3Q9BZ71 974 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 XPNPEP3Q9NQH7 507 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 KLK14Q9P0G3 267 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 HAO1Q9UJM8 370 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 H0Y3Z8 333 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 SMIM24O75264 130 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 TTC4O95801 387 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 TFDP2Q14188 446 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 CYP4F22Q6NT55 531 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 CAPN12Q6ZSI9 719 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PSTKQ8IV42 348 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 SLC43A3Q8NBI5 491 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PCSK9Q8NBP7 692 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PIWIL1Q96J94 861 aaKnown RBP11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 SERPINB12Q96P63 405 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 MYLK2Q9H1R3 596 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 SLCO1B3Q9NPD5 702 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 PCMTD2Q9NV79 361 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 MKS1Q9NXB0 559 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 FARP1Q9Y4F1 1045 aaPredicted RBP11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 ASB3Q9Y575 518 aa11.98□□□□□ -0.49
SNRNP200-208ENST00000497539 TOMM70O94826 608 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 TGM2P21980 687 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 DNAJC3Q13217 504 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 DPYSL3Q14195 570 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 NOMO1Q15155 1222 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 RNASEH2BQ5TBB1 312 aaKnown RBP11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 SLC9A4Q6AI14 798 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 ZNF449Q6P9G9 518 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 KCTD6Q8NC69 237 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 B3GALNT2Q8NCR0 500 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 PPP2R3CQ969Q6 453 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 RTP4Q96DX8 246 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 DUSP16Q9BY84 665 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 FAM49BQ9NUQ9 324 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 NINJ2Q9NZG7 142 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 PRPSAP2O60256 369 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 CST8O60676 142 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 DAB1O75553 588 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 PGK1P00558 417 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 TAC1P20366 129 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 SDC4P31431 198 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 OXCT1P55809 520 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 OTUD4Q01804 1114 aaKnown RBP11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 TMED2Q15363 201 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 KAZNQ674X7 775 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 NCCRP1Q6ZVX7 275 aaPredicted RBP11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 STRADAQ7RTN6 431 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 MAP7D3Q8IWC1 876 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 ACTL9Q8TC94 416 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 GIMAP1Q8WWP7 306 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms