RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 ADCY5O95622 1261 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 TFE3P19532 575 aaPredicted RBP16.88■□□□□ 0.29
FAM3A-220ENST00000497506 CD72P21854 359 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 RRM1P23921 792 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 CTHP32929 405 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 GJA4P35212 333 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
FAM3A-220ENST00000497506 TSR1Q2NL82 804 aaKnown RBP16.88■□□□□ 0.29
FAM3A-220ENST00000497506 ASTE1Q2TB18 679 aaPredicted RBP16.88■□□□□ 0.29
FAM3A-220ENST00000497506 GAB4Q2WGN9 574 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 VPS36Q86VN1 386 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 RALGPS2Q86X27 583 aaPredicted RBP16.88■□□□□ 0.29
FAM3A-220ENST00000497506 EMC1Q8N766 993 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 C3orf20Q8ND61 904 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 JOSD2Q8TAC2 188 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 SHDQ96IW2 340 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 CHP1Q99653 195 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 ZNHIT6Q9NWK9 470 aaKnown RBP16.88■□□□□ 0.29
FAM3A-220ENST00000497506 RRN3Q9NYV6 651 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 CALCOCO1Q9P1Z2 691 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 NENFQ9UMX5 172 aa16.88■□□□□ 0.29
FAM3A-220ENST00000497506 SIGLEC16A6NMB1 481 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 KRT3P12035 628 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 CDC25BP30305 580 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 HARS2P49590 506 aaKnown RBP16.87■□□□□ 0.29
FAM3A-220ENST00000497506 NR1H3Q13133 447 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 SLC25A52Q3SY17 297 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 ZC3H12AQ5D1E8 599 aaKnown RBP16.87■□□□□ 0.29
FAM3A-220ENST00000497506 LY6G5CQ5SRR4 150 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 PPP1R15BQ5SWA1 713 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 NUGGCQ68CJ6 796 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 TXNDC11Q6PKC3 985 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 BNIPLQ7Z465 357 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 TMEM25Q86YD3 366 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 UNC45BQ8IWX7 931 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 FAM217AQ8IXS0 508 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 AZIN2Q96A70 460 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 MSANTD3Q96H12 275 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 C1QTNF1Q9BXJ1 281 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 FAM204AQ9H8W3 233 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 TBC1D17Q9HA65 648 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 SPHK2Q9NRA0 654 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 DDIT4Q9NX09 232 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 STOML2Q9UJZ1 356 aa16.87■□□□□ 0.29
FAM3A-220ENST00000497506 MIA3Q5JRA6 1907 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 SSU72P8A0A1W2PR75 194 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 C2CD4BA6NLJ0 364 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 M0QYT0 321 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 MAN2B1O00754 1011 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 LATS1O95835 1130 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 GBP1P32455 592 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 RFC1P35251 1148 aaPredicted RBP16.86■□□□□ 0.29
FAM3A-220ENST00000497506 SULT1E1P49888 294 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 CWF19L1Q69YN2 538 aaKnown RBP16.86■□□□□ 0.29
FAM3A-220ENST00000497506 PLEKHA7Q6IQ23 1121 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 DNAJC24Q6P3W2 148 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 ALKBH5Q6P6C2 394 aaKnown RBP16.86■□□□□ 0.29
FAM3A-220ENST00000497506 ZNF852Q6ZMS4 543 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 ZNF687Q8N1G0 1237 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 CPXM2Q8N436 756 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 RXFP2Q8WXD0 754 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 FAM3CQ92520 227 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 PGAP3Q96FM1 320 aaPredicted RBP16.86■□□□□ 0.29
FAM3A-220ENST00000497506 P2RY11Q96G91 374 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 CFAP57Q96MR6 1250 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 TBCBQ99426 244 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 SELENOOQ9BVL4 669 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 FOXQ1Q9C009 403 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 PIGVQ9NUD9 493 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.86■□□□□ 0.29
FAM3A-220ENST00000497506 STAP1Q9ULZ2 295 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 ZDBF2Q9HCK1 2354 aa16.86■□□□□ 0.29
FAM3A-220ENST00000497506 SYNJ2BP-COX16A0A087WUM0 186 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 KANSL1LA0AUZ9 987 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 GFRA2O00451 464 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 ATMINO43313 823 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-220ENST00000497506 ACSL4O60488 711 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 ENDOD1O94919 500 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 ADH1CP00326 375 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 ADH5P11766 374 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 PDGFRAP16234 1089 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 CHKAP35790 457 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 VCPP55072 806 aaKnown RBP16.85■□□□□ 0.29
FAM3A-220ENST00000497506 GFPT1Q06210 699 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-220ENST00000497506 NME3Q13232 169 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 MAMLD1Q13495 774 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 SLC18A3Q16572 532 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 CCDC14Q49A88 953 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 ADGRF1Q5T601 910 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 NAIF1Q69YI7 327 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-220ENST00000497506 FLCNQ8NFG4 579 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 MFSD1Q9H3U5 465 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-220ENST00000497506 LTB4R2Q9NPC1 389 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 MARK1Q9P0L2 795 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 COX16Q9P0S2 106 aa16.85■□□□□ 0.29
FAM3A-220ENST00000497506 MTF2Q9Y483 593 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-220ENST00000497506 GOLGA6L7A0A1B0GV03 622 aa16.84■□□□□ 0.29
FAM3A-220ENST00000497506 KCNU1A8MYU2 1149 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms