RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 NFE2L1Q14494 772 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SEMA3AQ14563 771 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 TNIP1Q15025 636 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 TAF7Q15545 349 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 LRRC24Q50LG9 513 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ZNF628Q5EBL2 1059 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ZNF766Q5HY98 468 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ATXN7L2Q5T6C5 722 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 TTI2Q6NXR4 508 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 TRAT1Q6PIZ9 186 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SLC30A9Q6PML9 568 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 PAQR3Q6TCH7 311 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 PET117Q6UWS5 81 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 OTOP2Q7RTS6 562 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 FRMD5Q7Z6J6 570 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 CLEC14AQ86T13 490 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 DNAAF5Q86Y56 855 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ANKRD13BQ86YJ7 626 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ZNF366Q8N895 744 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 CHST13Q8NET6 341 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 NLGN4YQ8NFZ3 816 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 OR6J1Q8NGC5 347 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 GSDMBQ8TAX9 411 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 FNIP1Q8TF40 1166 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 FAM162AQ96A26 154 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SAAL1Q96ER3 474 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 MCRS1Q96EZ8 462 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SIPA1Q96FS4 1042 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 TSPAN17Q96FV3 270 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 MFSD14AQ96MC6 490 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 CMTM3Q96MX0 182 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 MOGAT1Q96PD6 335 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 GCNAQ96QF7 691 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 HTATIP2Q9BUP3 242 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 MROH8Q9H579 483 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 KAT14Q9H8E8 782 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 TNFRSF12AQ9NP84 129 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 LTB4R2Q9NPC1 389 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SNX15Q9NRS6 342 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 GIMAP4Q9NUV9 329 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 DNAJB9Q9UBS3 223 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 UBA2Q9UBT2 640 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 HESX1Q9UBX0 185 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 Q9UFV3 132 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ANGEL1Q9UNK9 670 aaKnown RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 RRP15Q9Y3B9 282 aaKnown RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 NEU2Q9Y3R4 380 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SYNRGQ9UMZ2 1314 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 GOLGA6L10A0A0M3HER8 536 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ARHGAP10A1A4S6 786 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 FRMD3A2A2Y4 597 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 GLOD5A6NK44 160 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 FAM90A7PA6NKC0 464 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 FAM90A22PA8MWA6 464 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 FAM90A12PA8MX19 464 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 FAM90A23PA8MXZ1 464 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 C9orf172C9J069 976 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 CAPN9O14815 690 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 HAUS5O94927 633 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 OR2C1O95371 312 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 GUCA1CO95843 209 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 F13BP05160 661 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 GLI1P08151 1106 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 MYBL1P10243 752 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 KRT10P13645 584 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ATP5JP18859 108 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 PEX19P40855 299 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 NKX3-2P78367 333 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 DUSP2Q05923 314 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ACTN3Q08043 901 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-224ENST00000497488 NFIAQ12857 509 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 C2orf76Q3KRA6 126 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 WDR72Q3MJ13 1102 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 FAM47AQ5JRC9 791 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 C9orf152Q5JTZ5 239 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 KRBOX4Q5JUW0 171 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 TMEM132EQ6IEE7 984 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 KRT80Q6KB66 452 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 TMEM154Q6P9G4 183 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ETV3LQ6ZN32 361 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 CHST9Q7L1S5 443 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 CHST3Q7LGC8 479 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 AMIGO3Q86WK7 504 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 SAMD14Q8IZD0 417 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-224ENST00000497488 C10orf53Q8N6V4 93 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 POC5Q8NA72 575 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 SLC2A12Q8TD20 617 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 NETO1Q8TDF5 533 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 PRPF31Q8WWY3 499 aaKnown RBP6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ARHGEF2Q92974 986 aaKnown RBP6.48□□□□□ -1.37
BRCA1-224ENST00000497488 TMEM237Q96Q45 408 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 RAB3IPQ96QF0 476 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-224ENST00000497488 KCNH6Q9H252 994 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 C7orf69Q9H7B7 122 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ARHGEF3Q9NR81 526 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 HCN3Q9P1Z3 774 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 DNAJB11Q9UBS4 358 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 VPS51Q9UID3 782 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ZFP69BQ9UJL9 534 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 DBR1Q9UK59 544 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms