RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 NAP1L5Q96NT1 182 aaPredicted RBP16.82■□□□□ 0.28
DNMT3A-215ENST00000496570 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
DNMT3A-215ENST00000496570 ARHGEF4Q9NR80 690 aa16.82■□□□□ 0.28
DNMT3A-215ENST00000496570 ZSCAN32Q9NX65 697 aa16.82■□□□□ 0.28
DNMT3A-215ENST00000496570 PLK2Q9NYY3 685 aa16.82■□□□□ 0.28
DNMT3A-215ENST00000496570 CLEC4EQ9ULY5 219 aa16.82■□□□□ 0.28
DNMT3A-215ENST00000496570 HOXA6P31267 233 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 GRIA2P42262 883 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 GABRB2P47870 512 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 SEC13P55735 322 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 YWHAZP63104 245 aaKnown RBP16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 RING1Q06587 406 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 TOGARAM2Q6ZUX3 1019 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 LUZP1Q86V48 1076 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 TERB1Q8NA31 727 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 ADAM32Q8TC27 787 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 BHMTQ93088 406 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 SLC2A13Q96QE2 648 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 POPDC2Q9HBU9 364 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 ASNSD1Q9NWL6 643 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 WDR35Q9P2L0 1181 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 DEC1Q9P2X7 70 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 PCDHGA2Q9Y5H1 932 aa16.81■□□□□ 0.28
DNMT3A-215ENST00000496570 A0A1B0GTH6 734 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 FAM170AA1A519 330 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 PRR23AA6NEV1 266 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 LATS1O95835 1130 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 APODP05090 189 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 CHKAP35790 457 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 TNFRSF4P43489 277 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 HARS2P49590 506 aaKnown RBP16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 SGSHP51688 502 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 NOMO3P69849 1222 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 FMO1Q01740 532 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 NNTQ13423 1086 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 C2orf27AQ580R0 203 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 FAM133BQ5BKY9 247 aaKnown RBP16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 NADSYN1Q6IA69 706 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 SYT13Q7L8C5 426 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 IL17RCQ8NAC3 791 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 TMEM35BQ8NCS4 154 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 NEK11Q8NG66 645 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 GOLGA1Q92805 767 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 FAM126AQ9BYI3 521 aaPredicted RBP16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 ADAM33Q9BZ11 813 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 DNAJC17Q9NVM6 304 aaKnown RBP16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 TLR6Q9Y2C9 796 aa16.8■□□□□ 0.28
DNMT3A-215ENST00000496570 GOLGA6L7A0A1B0GV03 622 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 PRRT4C9JH25 899 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 IRAK2O43187 625 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 ATG13O75143 517 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 GRAP2O75791 330 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 LSM8O95777 96 aaKnown RBP16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 CYP1A1P04798 512 aaPredicted RBP16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 GLI1P08151 1106 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 HNRNPLP14866 589 aaKnown RBP eCLIP16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 SLC6A4P31645 630 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 STAT1P42224 750 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 FNTBP49356 437 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 TBX4P57082 545 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 CDR2Q01850 454 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 SLC6A3Q01959 620 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 C2CD6Q53TS8 623 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 OTUD1Q5VV17 481 aaPredicted RBP16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 RNF43Q68DV7 783 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 GRAMD4Q6IC98 578 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 SLC26A9Q7LBE3 791 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 ZNF677Q86XU0 584 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 XYLT1Q86Y38 959 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 DEFB106AQ8N104 65 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 SUMF1Q8NBK3 374 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 OLIG1Q8TAK6 271 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 MYEOVQ96EZ4 313 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 SERPINB11Q96P15 392 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 NOX5Q96PH1 765 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 PCDHB18PQ96TA0 734 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 ZDHHC4Q9NPG8 344 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 CALCOCO1Q9P1Z2 691 aa16.79■□□□□ 0.28
DNMT3A-215ENST00000496570 ADAM23O75077 832 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 TRUB2O95900 331 aaKnown RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 HOXD9P28356 352 aaPredicted RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 PXNP49023 591 aaPredicted RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 MRPS21P82921 87 aaKnown RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 DMC1Q14565 340 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 PPP2R5DQ14738 602 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 EFHC1Q5JVL4 640 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 ADGRF1Q5T601 910 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 OR6B2Q6IFH4 312 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 ZC3H14Q6PJT7 736 aaKnown RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 CCDC33Q8N5R6 958 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 ALLCQ8N6M5 410 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 ZNF397Q8NF99 534 aaPredicted RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 CPA5Q8WXQ8 436 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 BAP1Q92560 729 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 NKD2Q969F2 451 aaPredicted RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 AZIN2Q96A70 460 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 PCMTD1Q96MG8 357 aaPredicted RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 XPO6Q96QU8 1125 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms