RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 ADAM22Q9P0K1 906 aa12.43□□□□□ -0.42
APTX-233ENST00000496030 MARCH2Q9P0N8 246 aa12.43□□□□□ -0.42
APTX-233ENST00000496030 DNMT3LQ9UJW3 386 aa12.43□□□□□ -0.42
APTX-233ENST00000496030 TMEM59LQ9UK28 342 aa12.43□□□□□ -0.42
APTX-233ENST00000496030 USP18Q9UMW8 372 aa12.43□□□□□ -0.42
APTX-233ENST00000496030 SMG5Q9UPR3 1016 aaKnown RBP12.43□□□□□ -0.42
APTX-233ENST00000496030 GRAP2O75791 330 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 IGLV3-25P01717 112 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 KLKB1P03952 638 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 FECHP22830 423 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 NSFP46459 744 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 GSCP56915 257 aaPredicted RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 C1QBPQ07021 282 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 ZNF528Q3MIS6 628 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 PPM1JQ5JR12 505 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 OTUD1Q5VV17 481 aaPredicted RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 CNGA4Q8IV77 575 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 DEFB106AQ8N104 65 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 GPR161Q8N6U8 529 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 DQX1Q8TE96 717 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 DEPDC1BQ8WUY9 529 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 NT5C3BQ969T7 300 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 FAM149B1Q96BN6 582 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 CDK5RAP1Q96SZ6 601 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 TRMT61BQ9BVS5 477 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 SYNCQ9H7C4 482 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 GRPEL1Q9HAV7 217 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 POPDC2Q9HBU9 364 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 SLC2A4RGQ9NR83 387 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 OLA1Q9NTK5 396 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 SEPT11Q9NVA2 429 aaKnown RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 CFAP97Q9P2B7 532 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 SFMBT1Q9UHJ3 866 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 MTF2Q9Y483 593 aaPredicted RBP12.42□□□□□ -0.42
APTX-233ENST00000496030 COL4A2P08572 1712 aa12.42□□□□□ -0.42
APTX-233ENST00000496030 MYOFQ9NZM1 2061 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 GOLGA8SH3BPF8 625 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 DPYSL4O14531 572 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 CHADO15335 359 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 HSF2BPO75031 334 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 RTN2O75298 545 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 STC2O76061 302 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 GJB6O95452 261 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 IGLV3-27P01718 113 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 FTLP02792 175 aaPredicted RBP12.41□□□□□ -0.42
APTX-233ENST00000496030 TPM1P09493 284 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 NCAM1P13591 858 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 STARD6P59095 220 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 CSTF1Q05048 431 aaKnown RBP12.41□□□□□ -0.42
APTX-233ENST00000496030 MTF1Q14872 753 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 TRIP4Q15650 581 aaPredicted RBP12.41□□□□□ -0.42
APTX-233ENST00000496030 TDRD12Q587J7 1177 aaKnown RBP12.41□□□□□ -0.42
APTX-233ENST00000496030 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 Q6ZNB5 142 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 TOGARAM2Q6ZUX3 1019 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 HTR3DQ70Z44 454 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 RSRC2Q7L4I2 434 aaKnown RBP12.41□□□□□ -0.42
APTX-233ENST00000496030 ARCQ7LC44 396 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 TADA2BQ86TJ2 420 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 KIAA1958Q8N8K9 716 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 ZBTB44Q8NCP5 570 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 RNF139Q8WU17 664 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 VCPIP1Q96JH7 1222 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 ZFYVE19Q96K21 471 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 EPC1Q9H2F5 836 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 HPS4Q9NQG7 708 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 SPATA6Q9NWH7 488 aaPredicted RBP12.41□□□□□ -0.42
APTX-233ENST00000496030 CALCOCO1Q9P1Z2 691 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 RASAL2Q9UJF2 1139 aa12.41□□□□□ -0.42
APTX-233ENST00000496030 SLC12A8A0AV02 714 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 E2F8A0AVK6 867 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 OTOL1A6NHN0 477 aaPredicted RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 SHISA7A6NL88 538 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 SCAMP3O14828 347 aaKnown RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 ZNF263O14978 683 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 MSI1O43347 362 aaKnown RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 LAMTOR5O43504 91 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 LILRB5O75023 590 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 DAB1O75553 588 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 CALB1P05937 261 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 TFE3P19532 575 aaPredicted RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 RRM1P23921 792 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 GDI1P31150 447 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 RFC1P35251 1148 aaPredicted RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 FLT3P36888 993 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 MATKP42679 507 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 COG7P83436 770 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 TNK2Q07912 1038 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 ARHGAP29Q52LW3 1261 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 DCAF6Q58WW2 860 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 FAM102AQ5T9C2 384 aaPredicted RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 TSSK4Q6SA08 328 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms