RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CCR1P32246 355 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 PTGIRP43119 386 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 EPHB3P54753 998 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 DYNLT1P63172 113 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 MRPS25P82663 173 aaKnown RBP25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 ADCY2Q08462 1091 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 MMRN1Q13201 1228 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 NNTQ13423 1086 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 MTMR3Q13615 1198 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 CUL1Q13616 776 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 BYSLQ13895 437 aaKnown RBP25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 EIF1ADQ8N9N8 165 aaKnown RBP25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 HNRNPLLQ8WVV9 542 aaKnown RBP25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 ATG4AQ8WYN0 398 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 MTMR10Q9NXD2 777 aa25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 UXTQ9UBK9 157 aaPredicted RBP25.31■■□□□ 1.64
PPP1R3F-205ENST00000495799 CCDC85CA6NKD9 419 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 CNPP09543 421 aaKnown RBP25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 ZDHHC11BP0C7U3 371 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 SLC2A3P11169 496 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 EIF4EBP2Q13542 120 aaPredicted RBP25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 PPP2R5DQ14738 602 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 PPP1R7Q15435 360 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 SLC9A4Q6AI14 798 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 TMCO3Q6UWJ1 677 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 ZNF276Q8N554 614 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 P3H4Q92791 437 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 NKD2Q969F2 451 aaPredicted RBP25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 TRMT2BQ96GJ1 504 aaKnown RBP25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 TCF25Q9BQ70 676 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 ERP44Q9BS26 406 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 TKTL2Q9H0I9 626 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 FAM114A2Q9NRY5 505 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 DRG1Q9Y295 367 aaKnown RBP25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 INSL5Q9Y5Q6 135 aa25.3■■□□□ 1.64
PPP1R3F-205ENST00000495799 MCF2LO15068 1137 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 IL4RP24394 825 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 MAGEA10P43363 369 aaPredicted RBP25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 PPP3CCP48454 512 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 CCNI2Q6ZMN8 369 aaPredicted RBP25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 CCDC149Q6ZUS6 474 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 ITIH5Q86UX2 942 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 CASP10Q92851 521 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 MYRFLQ96LU7 910 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 EPAS1Q99814 870 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 ARFGAP3Q9NP61 516 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 TLR9Q9NR96 1032 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 OSER1Q9NX31 292 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 ARHGEF38Q9NXL2 777 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 TLR6Q9Y2C9 796 aa25.29■■□□□ 1.64
PPP1R3F-205ENST00000495799 KCNJ1P48048 391 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 KPNA1P52294 538 aaPredicted RBP25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 VCPP55072 806 aaKnown RBP25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 OTUD4Q01804 1114 aaKnown RBP25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 TWF1Q12792 350 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 MTA1Q13330 715 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 PCDH19Q8TAB3 1148 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 ACTL9Q8TC94 416 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 CCHCR1Q8TD31 782 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 KLHL5Q96PQ7 755 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 CSPG4P5Q96PW8 444 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 HAPLN3Q96S86 360 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 CWC15Q9P013 229 aaKnown RBP25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 SFMBT1Q9UHJ3 866 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 ZNF148Q9UQR1 794 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 ASB3Q9Y575 518 aa25.28■■□□□ 1.64
PPP1R3F-205ENST00000495799 EEF2KO00418 725 aaKnown RBP25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 ZMYND10O75800 440 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 ITGAVP06756 1048 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 HTR7P34969 479 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 HCAR3P49019 387 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 PGFP49763 221 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 CLCN6P51797 869 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 C9orf50Q5SZB4 431 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 SNX30Q5VWJ9 437 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 GSTA5Q7RTV2 222 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 SLC35B2Q8TB61 432 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 SPPL3Q8TCT6 385 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 POF1BQ8WVV4 589 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 SEC14L1Q92503 715 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 HAUS1Q96CS2 278 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 ZNF512Q96ME7 567 aaPredicted RBP25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 OSBPL2Q9H1P3 480 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 PLEKHA4Q9H4M7 779 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 DNPEPQ9ULA0 475 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 BHMG1C9JSJ3 638 aaPredicted RBP25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 NR2C2P49116 596 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 DRG2P55039 364 aaKnown RBP25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 NOMO1Q15155 1222 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 C10orf120Q5SQS8 335 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 BZW1Q7L1Q6 419 aaKnown RBP25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 TRIM51Q9BSJ1 452 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 C17orf80Q9BSJ5 609 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 ALG13Q9NP73 1137 aaKnown RBP25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 TRPM5Q9NZQ8 1165 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 SLC12A6Q9UHW9 1150 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 PCDHA11Q9Y5I1 949 aa25.27■■□□□ 1.64
PPP1R3F-205ENST00000495799 DAPK3O43293 454 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms