RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 CCDC38Q502W7 563 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 EFHC2Q5JST6 749 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 DCLRE1AQ6PJP8 1040 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 ZBED8Q8IZ13 594 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 ADAM32Q8TC27 787 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 PGAP3Q96FM1 320 aaPredicted RBP11.04□□□□□ -0.64
CLCN6-208ENST00000494028 SLC9A7Q96T83 725 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 FTHL17Q9BXU8 183 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 PRDM16Q9HAZ2 1276 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 TMEM161AQ9NX61 479 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 COX16Q9P0S2 106 aa11.04□□□□□ -0.64
CLCN6-208ENST00000494028 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
CLCN6-208ENST00000494028 EXOC1LA0A1B0GW35 172 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 HACD1B0YJ81 288 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 DNM1LO00429 736 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 CDH16O75309 829 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 DGKIO75912 1065 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 IGLV3-25P01717 112 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 HSPA1AP0DMV8 641 aaKnown RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 HSPA1BP0DMV9 641 aaKnown RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 CHN1P15882 459 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 ATP5DP30049 168 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 STIP1P31948 543 aaKnown RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 NR2C2P49116 596 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 CDK7P50613 346 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 SLC5A3P53794 718 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 AIF1P55008 147 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 YWHAHQ04917 246 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 CBLBQ13191 982 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 EFTUD2Q15029 972 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■□□ 17.9
CLCN6-208ENST00000494028 PAFAH1B3Q15102 231 aaKnown RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 PRKD1Q15139 912 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 TMED2Q15363 201 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 MAPRE1Q15691 268 aaKnown RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 HP1BP3Q5SSJ5 553 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 FAXCQ5TGI0 409 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 PM20D1Q6GTS8 502 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 VSTM1Q6UX27 236 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 CAPN12Q6ZSI9 719 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 ZNF534Q76KX8 674 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 EXOC3L1Q86VI1 746 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 TDRPQ86YL5 185 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 THEM5Q8N1Q8 247 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 AGGF1Q8N302 714 aaeCLIP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 CCDC110Q8TBZ0 833 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 DQX1Q8TE96 717 aaKnown RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 SH3TC2Q8TF17 1288 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 LRRN4Q8WUT4 740 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 ARHGEF2Q92974 986 aaKnown RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 ZCWPW1Q9H0M4 648 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 UNC93B1Q9H1C4 597 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 RABEP2Q9H5N1 569 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 VPS37BQ9H9H4 285 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 RAB6BQ9NRW1 208 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 DDIT4Q9NX09 232 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 RRN3Q9NYV6 651 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 PRDM4Q9UKN5 801 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 NEU3Q9UQ49 428 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 PRG3Q9Y2Y8 225 aaPredicted RBP11.03□□□□□ -0.64
CLCN6-208ENST00000494028 HTTP42858 3142 aa11.03□□□□□ -0.64
CLCN6-208ENST00000494028 A0A0A0MRY4 1105 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 EEF2KO00418 725 aaKnown RBP11.02□□□□□ -0.65
CLCN6-208ENST00000494028 CAPN9O14815 690 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 IRAK2O43187 625 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 TRAPPC3O43617 180 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 OR4Q2P0C623 313 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 NCAM1P13591 858 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 TSHRP16473 764 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 TPSB2P20231 275 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 OR1G1P47890 313 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 GATMP50440 423 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 HNRNPH2P55795 449 aaKnown RBP11.02□□□□□ -0.65
CLCN6-208ENST00000494028 PPARDQ03181 441 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 TPSAB1Q15661 275 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 PLEKHG4Q58EX7 1191 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 FAM182AQ5T1J6 154 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 KCNT2Q6UVM3 1135 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 PPP1R21Q6ZMI0 780 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 C4orf50Q6ZRC1 276 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 BEND5Q7L4P6 421 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 TAOK1Q7L7X3 1001 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 CYP4X1Q8N118 509 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 CCDC33Q8N5R6 958 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 FBXO36Q8NEA4 188 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 MDM1Q8TC05 714 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 BCAS4Q8TDM0 211 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.65
CLCN6-208ENST00000494028 EDEM1Q92611 657 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 CENPTQ96BT3 561 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 SPATA13Q96N96 652 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 XPO6Q96QU8 1125 aaKnown RBP11.02□□□□□ -0.65
CLCN6-208ENST00000494028 KLC2Q9H0B6 622 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 EPN3Q9H201 632 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms