RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 SNX17Q15036 470 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 SPATA24Q86W54 205 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 ARHGAP24Q8N264 748 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 MREGQ8N565 214 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 FZD8Q9H461 694 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 XPNPEP3Q9NQH7 507 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 SLC12A6Q9UHW9 1150 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 UBA6A0AVT1 1052 aaPredicted RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 B2RBV5 119 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 ERVK-10P10266 1014 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 TFE3P19532 575 aaPredicted RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 PMLP29590 882 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 PBX3P40426 434 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 CDKN2BP42772 138 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 HDAC11Q96DB2 347 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 ZNF512Q96ME7 567 aaPredicted RBP11.38□□□□□ -0.59
COL2A1-208ENST00000493991 PRDM12Q9H4Q4 367 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 ANLNQ9NQW6 1124 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 GTSE1Q9NYZ3 720 aa11.38□□□□□ -0.59
COL2A1-208ENST00000493991 SHANK3Q9BYB0 1731 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 APOC4-APOC2K7ER74 178 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 GPC4O75487 556 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 APOC2P02655 101 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 SNRPAP09012 282 aaKnown RBP11.37□□□□□ -0.59
COL2A1-208ENST00000493991 PAEPP09466 180 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 GRIA1P42261 906 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 ZNF143P52747 638 aaPredicted RBP11.37□□□□□ -0.59
COL2A1-208ENST00000493991 STILQ15468 1287 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 HSP90AA5PQ58FG0 334 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 FNBP1LQ5T0N5 605 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 FITM2Q8N6M3 262 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 ALLCQ8N6M5 410 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 PPTC7Q8NI37 304 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 KATNAL1Q9BW62 490 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 CXCL16Q9H2A7 254 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 MANSC1Q9H8J5 431 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 ZDHHC18Q9NUE0 388 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 SLC17A6Q9P2U8 582 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 TMEM59LQ9UK28 342 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 PACSIN3Q9UKS6 424 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 SSX2IPQ9Y2D8 614 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 RNF103O00237 685 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 PTPN1P18031 435 aaKnown RBP11.37□□□□□ -0.59
COL2A1-208ENST00000493991 ATICP31939 592 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 OLIG2Q13516 323 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 RPS6KA2Q15349 733 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 NLRP9Q7RTR0 991 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 POLNQ7Z5Q5 900 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 B3GALNT2Q8NCR0 500 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 PGM2Q96G03 612 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
COL2A1-208ENST00000493991 RNF157Q96PX1 679 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 CCDC68Q9H2F9 335 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 GPBP1L1Q9HC44 474 aaPredicted RBP11.37□□□□□ -0.59
COL2A1-208ENST00000493991 SMPD4Q9NXE4 827 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 IPPQ9Y573 584 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 NRCAMQ92823 1304 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 GOLGA8QA0A0J9YX86 632 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 GOLGA8OA6NCC3 632 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 GOLGA8NF8WBI6 632 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 PCSK1P29120 753 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 MAP2K5Q13163 448 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 RABGAP1LQ5R372 815 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 C10orf120Q5SQS8 335 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
COL2A1-208ENST00000493991 CD302Q8IX05 232 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 SPATA6LQ8N4H0 392 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 ZCCHC9Q8N567 271 aaKnown RBP11.37□□□□□ -0.59
COL2A1-208ENST00000493991 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 EFHBQ8N7U6 833 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 SP110Q9HB58 689 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 ZNF711Q9Y462 761 aa11.37□□□□□ -0.59
COL2A1-208ENST00000493991 MYBPHLA2RUH7 354 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 PAPSS1O43252 624 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 MSI1O43347 362 aaKnown RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 DNAJC6O75061 913 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 DARSP14868 501 aaKnown RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 ETS2P15036 469 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 TGM2P21980 687 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 PSMB4P28070 264 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 USP10Q14694 798 aaKnown RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 OLFML2BQ68BL8 750 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 OVOS1Q6IE37 1185 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 YTHDF3Q7Z739 585 aaKnown RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 WDR75Q8IWA0 830 aaKnown RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 UNC5BQ8IZJ1 945 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 TTC39CQ8N584 583 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 ATPAF2Q8N5M1 289 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 RMDN1Q96DB5 314 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 STRA6Q9BX79 667 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 SLC17A7Q9P2U7 560 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 SFMBT1Q9UHJ3 866 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 CYTH4Q9UIA0 394 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 SNAI1O95863 264 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 ECHS1P30084 290 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 GJA5P36382 358 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms