RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 MOSPD3O75425 235 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 IGLV3-25P01717 112 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 FYNP06241 537 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 LAMP2P13473 410 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 ZNF135P52742 658 aaPredicted RBP15.51■□□□□ 0.07
ACTB-213ENST00000493945 CCDC14Q49A88 953 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 EFHC2Q5JST6 749 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 ZFYVE27Q5T4F4 411 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 SCYL2Q6P3W7 929 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 PSTKQ8IV42 348 aaKnown RBP15.51■□□□□ 0.07
ACTB-213ENST00000493945 ARID3BQ8IVW6 561 aaPredicted RBP15.51■□□□□ 0.07
ACTB-213ENST00000493945 KIAA1524Q8TCG1 905 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 ATXN2LQ8WWM7 1075 aaKnown RBP15.51■□□□□ 0.07
ACTB-213ENST00000493945 BTN2A3PQ96KV6 586 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 IRX2Q9BZI1 471 aaPredicted RBP15.51■□□□□ 0.07
ACTB-213ENST00000493945 SMPD4Q9NXE4 827 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 NUDT5Q9UKK9 219 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 DOCK8Q8NF50 2099 aa15.51■□□□□ 0.07
ACTB-213ENST00000493945 GRXCR2A6NFK2 248 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 TMEM110-MUSTN1A8MSY1 372 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 BUB1O43683 1085 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 GJB6O95452 261 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 IRF1P10914 325 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 CHKAP35790 457 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 CETN2P41208 172 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 USP4Q13107 963 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 BOLA3Q53S33 107 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 STXBP5Q5T5C0 1151 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 TTC16Q8NEE8 873 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 TPCN2Q8NHX9 752 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 ADAM32Q8TC27 787 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 BPIFB1Q8TDL5 484 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 SH3RF2Q8TEC5 729 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 CENPIQ92674 756 aaPredicted RBP15.5■□□□□ 0.07
ACTB-213ENST00000493945 KHSRPQ92945 711 aaKnown RBP eCLIP15.5■□□□□ 0.07
ACTB-213ENST00000493945 AZIN2Q96A70 460 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 NTAN1Q96AB6 310 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 ELSPBP1Q96BH3 223 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 KLF16Q9BXK1 252 aaPredicted RBP15.5■□□□□ 0.07
ACTB-213ENST00000493945 LACRTQ9GZZ8 138 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 DONSONQ9NYP3 566 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 ZKSCAN5Q9Y2L8 839 aa15.5■□□□□ 0.07
ACTB-213ENST00000493945 MIF4GDA9UHW6 222 aaKnown RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 LEFTY2O00292 366 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 MDM4O15151 490 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 MSI1O43347 362 aaKnown RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 PSTPIP1O43586 416 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 ECI2O75521 394 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 ENDOD1O94919 500 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 TBX18O95935 607 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 CYBBP04839 570 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 HMBSP08397 361 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 CORO1AP31146 461 aaKnown RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 IFNAR2P48551 515 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 CXCR3P49682 368 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 C15orf59Q2T9L4 293 aaPredicted RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 LRRC31Q6UY01 552 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 PEX26Q7Z412 305 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 POLNQ7Z5Q5 900 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 SLFN11Q7Z7L1 901 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 MAP7D3Q8IWC1 876 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 CCDC117Q8IWD4 279 aaPredicted RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 RHOT1Q8IXI2 618 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 ZDHHC14Q8IZN3 488 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 CCAR2Q8N163 923 aaKnown RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 UBL4BQ8N7F7 174 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 ZNF557Q8N988 423 aaPredicted RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 USP13Q92995 863 aaPredicted RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 EXOC4Q96A65 974 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 MYADMQ96S97 322 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 RNF38Q9H0F5 515 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 DDX56Q9NY93 547 aaKnown RBP15.49■□□□□ 0.07
ACTB-213ENST00000493945 CFAP97Q9P2B7 532 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 IGSF9Q9P2J2 1179 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 AMFRQ9UKV5 643 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 USP18Q9UMW8 372 aa15.49■□□□□ 0.07
ACTB-213ENST00000493945 CCDC66A2RUB6 948 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 BUB1BO60566 1050 aaPredicted RBP15.48■□□□□ 0.07
ACTB-213ENST00000493945 LRCH4O75427 683 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 STC2O76061 302 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 MOCS2O96007 188 aaPredicted RBP15.48■□□□□ 0.07
ACTB-213ENST00000493945 IGLV3-27P01718 113 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 HTR7P34969 479 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 PGFP49763 221 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 PDGFRLQ15198 375 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 FAM78AQ5JUQ0 283 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 RABGAP1LQ5R372 815 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 LRRC38Q5VT99 294 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 TTC39BQ5VTQ0 682 aaPredicted RBP15.48■□□□□ 0.07
ACTB-213ENST00000493945 FAM131BQ86XD5 332 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 TEKT4Q8WW24 435 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 RPGRIP1Q96KN7 1286 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 HAPLN3Q96S86 360 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 CYP2S1Q96SQ9 504 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 EPAS1Q99814 870 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 TKTL2Q9H0I9 626 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 KCND1Q9NSA2 647 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 PIGVQ9NUD9 493 aa15.48■□□□□ 0.07
ACTB-213ENST00000493945 TRMT1Q9NXH9 659 aaKnown RBP15.48■□□□□ 0.07
ACTB-213ENST00000493945 RCCD1A6NED2 376 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms