RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ERGIC2Q96RQ1 377 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 P2RY13Q9BPV8 354 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 SLC4A5Q9BY07 1137 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 TSPY26PQ9H489 355 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 RXFP3Q9NSD7 469 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 SEPT11Q9NVA2 429 aaKnown RBP10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 SFMBT1Q9UHJ3 866 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 CYTH4Q9UIA0 394 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 RAB23Q9ULC3 237 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 DAAM1Q9Y4D1 1078 aa10.88□□□□□ -0.67
TRAPPC12-222ENST00000493792 SPEGQ15772 3267 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 MSI1O43347 362 aaKnown RBP10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 PROS1P07225 676 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 MMEP08473 750 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 HOXC13P31276 330 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 CXCL12P48061 93 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 GALK1P51570 392 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 LIMK1P53667 647 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 FANCCQ00597 558 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 SATB1Q01826 763 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 NAIF1Q69YI7 327 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 PRR23BQ6ZRT6 265 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 HTR3DQ70Z44 454 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 APTXQ7Z2E3 356 aaKnown RBP10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 NOP9Q86U38 636 aaKnown RBP10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 ADGRG2Q8IZP9 1017 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 SCML4Q8N228 414 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 SLC20A1Q8WUM9 679 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 DDX1Q92499 740 aaKnown RBP10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 CD101Q93033 1021 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 BHMTQ93088 406 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 NAP1L5Q96NT1 182 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 CPXM1Q96SM3 734 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 DCLK3Q9C098 648 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 RTN4Q9NQC3 1192 aaKnown RBP10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 TJP2Q9UDY2 1190 aa10.87□□□□□ -0.67
TRAPPC12-222ENST00000493792 CHURC1-FNTBB4DL54 471 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 NEDD8-MDP1E9PL57 170 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 K7ESF4 209 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 PAPSS1O43252 624 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 GRAP2O75791 330 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 FNTBP49356 437 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 HARS2P49590 506 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 CCR3P51677 355 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 UBASH3AP57075 661 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 GAD2Q05329 585 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 KDSRQ06136 332 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 DGKKQ5KSL6 1271 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 NAA35Q5VZE5 725 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 RHBDF2Q6PJF5 856 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 TMEM110Q86TL2 294 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 ERICH1Q86X53 443 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 TMEM25Q86YD3 366 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 DENND1CQ8IV53 801 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 SPEM1Q8N4L4 309 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 ZNF276Q8N554 614 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 WDTC1Q8N5D0 677 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 KIAA1958Q8N8K9 716 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 NAT16Q8N8M0 369 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 MSANTD4Q8NCY6 345 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 RNF214Q8ND24 703 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 EPS8L1Q8TE68 723 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 PLD4Q96BZ4 506 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 TRIM62Q9BVG3 475 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 BBS2Q9BXC9 721 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 LHX5Q9H2C1 402 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 SPHK2Q9NRA0 654 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 C2orf42Q9NWW7 574 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 NAALADL1Q9UQQ1 740 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 ZNF510Q9Y2H8 683 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 SDK1Q7Z5N4 2213 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 ZFYVE26Q68DK2 2539 aa10.86□□□□□ -0.67
TRAPPC12-222ENST00000493792 SYNJ2BP-COX16A0A087WUM0 186 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 A0A1B0GTH6 734 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 GOLGA8SH3BPF8 625 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 TRDMT1O14717 391 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 PAPSS2O95340 614 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 EGFP01133 1207 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 ERBB2P04626 1255 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 CCDC172P0C7W6 258 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 CNR2P34972 360 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 OPRD1P41143 372 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 RPL34P49207 117 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 SEC13P55735 322 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 TBX4P57082 545 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 JAM2P57087 298 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 RNASE9P60153 205 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 YWHAZP63104 245 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 TAF5Q15542 800 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 PTPN20Q4JDL3 420 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 DCAF6Q58WW2 860 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 TMEM196Q5HYL7 178 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 EFHC1Q5JVL4 640 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 FSTL4Q6MZW2 842 aa10.85□□□□□ -0.67
TRAPPC12-222ENST00000493792 LRSAM1Q6UWE0 723 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms