RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 OR6B3Q8NGW1 331 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 OVCA2Q8WZ82 227 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 FBXO32Q969P5 355 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 ACOX2Q99424 681 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 DUSP9Q99956 384 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 ELOVL4Q9GZR5 314 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 CCSER2Q9H7U1 834 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 PANK4Q9NVE7 773 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 WSB2Q9NYS7 404 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 PLEKHB1Q9UF11 243 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 STARD13Q9Y3M8 1113 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 SRPRBQ9Y5M8 271 aaKnown RBP12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 FBN3Q75N90 2809 aa12.38□□□□□ -0.43
CACNA1C-228ENST00000492150 A0A087X0B3 334 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 METTL12A8MUP2 240 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 DFNA5O60443 496 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 RTN3O95197 1032 aaPredicted RBP12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 NEFLP07196 543 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 ZDHHC11BP0C7U3 371 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 AFMP43652 599 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 INHBCP55103 352 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 FOXK1P85037 733 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 HECTD3Q5T447 861 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 DCAF12L1Q5VU92 463 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 EGFLAMQ63HQ2 1017 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 TICAM1Q8IUC6 712 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 PDZD8Q8NEN9 1154 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 ERLEC1Q96DZ1 483 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 KCNK16Q96T55 309 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 PANK2Q9BZ23 570 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 OSGEPQ9NPF4 335 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 CD93Q9NPY3 652 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 IL37Q9NZH6 218 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 SNX11Q9Y5W9 270 aa12.37□□□□□ -0.43
CACNA1C-228ENST00000492150 SETD2Q9BYW2 2564 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 GREM1O60565 184 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 LDOC1O95751 146 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 PGFP49763 221 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 SKOR1P84550 965 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 DNAJC3Q13217 504 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 ANO4Q32M45 955 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 GRAMD4Q6IC98 578 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 PAQR9Q6ZVX9 377 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 B3GALNT2Q8NCR0 500 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 HPS3Q969F9 1004 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 TOE1Q96GM8 510 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 MRGPRX1Q96LB2 322 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 GABRG3Q99928 467 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 SLC6A17Q9H1V8 727 aa12.36□□□□□ -0.43
CACNA1C-228ENST00000492150 FAM92AA1XBS5 289 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 A8MXQ7 604 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 PRRT4C9JH25 899 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 STAU1O95793 577 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 ITGB2P05107 769 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 IRF1P10914 325 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 GRIA4P48058 902 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 CSNK1EP49674 416 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 TUBP50607 506 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 TNNC1P63316 161 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 ASIC1P78348 528 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 TEAD4Q15561 434 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 SNRNP35Q16560 246 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 ARL13BQ3SXY8 428 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 IGF2-ASQ6U949 168 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 CCDC81Q6ZN84 652 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 CCDC73Q6ZRK6 1079 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 HTR3DQ70Z44 454 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 ZNF516Q92618 1163 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 CCDC97Q96F63 343 aaPredicted RBP12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 CGRRF1Q99675 332 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 TRIM9Q9C026 710 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 XYLT2Q9H1B5 865 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 PCED1AQ9H1Q7 454 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 KIAA1586Q9HCI6 787 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 THSD1Q9NS62 852 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 DNAJC17Q9NVM6 304 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 ANKRD6Q9Y2G4 727 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 RAD54BQ9Y620 910 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 F8P00451 2351 aa12.35□□□□□ -0.43
CACNA1C-228ENST00000492150 WASH3PC4AMC7 463 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 H0Y8X5 98 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 TGFB1I1O43294 461 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 CACNG3O60359 315 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 TNNI1P19237 187 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 TNFRSF8P28908 595 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 TXLNAP40222 546 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 STAT6P42226 847 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 SLC5A3P53794 718 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms