RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 CEBPBP17676 345 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 SLC11A2P49281 568 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 GNG11P61952 73 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 SLC7A9P82251 487 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 RING1Q06587 406 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 PPP2R5DQ14738 602 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 C15orf59Q2T9L4 293 aaPredicted RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 CCDC14Q49A88 953 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 EFHC2Q5JST6 749 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 ZNF569Q5MCW4 686 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 CC2D1AQ6P1N0 951 aaPredicted RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 MTSS1LQ765P7 747 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 RHOT1Q8IXI2 618 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 ARL14EPQ8N8R7 260 aaPredicted RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 ADAM32Q8TC27 787 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 TCEAL4Q96EI5 215 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 BTBD6Q96KE9 485 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 S1PR5Q9H228 398 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 OSER1Q9NX31 292 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 DDX56Q9NY93 547 aaKnown RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 TRIM10Q9UDY6 481 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 SFMBT1Q9UHJ3 866 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 NUDT5Q9UKK9 219 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 CDH7Q9ULB5 785 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 ZNF510Q9Y2H8 683 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 USP15Q9Y4E8 981 aaPredicted RBP11.39□□□□□ -0.59
VARS2-210ENST00000490699 DUSP10Q9Y6W6 482 aa11.39□□□□□ -0.59
VARS2-210ENST00000490699 OBSL1O75147 1896 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 C2orf16Q68DN1 1984 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 CCDC66A2RUB6 948 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 SLC9A3R1O14745 358 aaPredicted RBP11.38□□□□□ -0.59
VARS2-210ENST00000490699 PSTPIP1O43586 416 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 OLFM2O95897 454 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 FYNP06241 537 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 HMBSP08397 361 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 IRF1P10914 325 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 TNNT1P13805 278 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 GJC1P36383 396 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 LTBRP36941 435 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 CCR2P41597 374 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 DLX2Q07687 328 aaPredicted RBP11.38□□□□□ -0.59
VARS2-210ENST00000490699 SLC5A9Q2M3M2 681 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 BOLA3Q53S33 107 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 SLFN11Q7Z7L1 901 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 TMEM150AQ86TG1 271 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 PSTKQ8IV42 348 aaKnown RBP11.38□□□□□ -0.59
VARS2-210ENST00000490699 MAP7D3Q8IWC1 876 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 REXO1L1PQ8IX06 675 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 NPAS3Q8IXF0 933 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 YAF2Q8IY57 180 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 CELF5Q8N6W0 485 aaKnown RBP11.38□□□□□ -0.59
VARS2-210ENST00000490699 TDRD5Q8NAT2 981 aaKnown RBP11.38□□□□□ -0.59
VARS2-210ENST00000490699 ITFG1Q8TB96 612 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 ZSCAN18Q8TBC5 510 aaPredicted RBP11.38□□□□□ -0.59
VARS2-210ENST00000490699 FGF13Q92913 245 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 SMARCD2Q92925 531 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 KHSRPQ92945 711 aaKnown RBP eCLIP11.38□□□□□ -0.59
VARS2-210ENST00000490699 NT5C3BQ969T7 300 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 TDP1Q9NUW8 608 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 THG1LQ9NWX6 298 aaKnown RBP11.38□□□□□ -0.59
VARS2-210ENST00000490699 SMPD4Q9NXE4 827 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 ARHGAP26Q9UNA1 814 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 CPQQ9Y646 472 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 ALG6Q9Y672 507 aa11.38□□□□□ -0.59
VARS2-210ENST00000490699 DENND4CQ5VZ89 1909 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.37□□□□□ -0.59
VARS2-210ENST00000490699 GRID2IPA4D2P6 1211 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 MDM4O15151 490 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 MSI1O43347 362 aaKnown RBP11.37□□□□□ -0.59
VARS2-210ENST00000490699 LRCH4O75427 683 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 ENDOD1O94919 500 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 LATS1O95835 1130 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 TBX18O95935 607 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 MOCS2O96007 188 aaPredicted RBP11.37□□□□□ -0.59
VARS2-210ENST00000490699 COMTP21964 271 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 WEE1P30291 646 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 CXCR3P49682 368 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 ZNF135P52742 658 aaPredicted RBP11.37□□□□□ -0.59
VARS2-210ENST00000490699 OGDHQ02218 1023 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 KRT81Q14533 505 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 RPS6KA1Q15418 735 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 LRRC38Q5VT99 294 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 LRRC31Q6UY01 552 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 POLNQ7Z5Q5 900 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 FAM131BQ86XD5 332 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
VARS2-210ENST00000490699 CENPIQ92674 756 aaPredicted RBP11.37□□□□□ -0.59
VARS2-210ENST00000490699 NTAN1Q96AB6 310 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 BTN2A3PQ96KV6 586 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 SLC46A2Q9BY10 475 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 TRIM7Q9C029 511 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 TKTL2Q9H0I9 626 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 POMKQ9H5K3 350 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 ZWILCHQ9H900 591 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 ZFP14Q9HCL3 533 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 PIGVQ9NUD9 493 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 DONSONQ9NYP3 566 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 CFAP97Q9P2B7 532 aa11.37□□□□□ -0.59
VARS2-210ENST00000490699 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms