RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SERPINA13PQ6UXR4 307 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 LSMEM2Q8N112 164 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 ZNF366Q8N895 744 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 RBBP8NLQ8NC74 664 aaPredicted RBP14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 MMS19Q96T76 1030 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 CIPCQ9C0C6 399 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 EBF2Q9HAK2 575 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 PDE11AQ9HCR9 933 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 ELOVL2Q9NXB9 296 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 KCNK4Q9NYG8 393 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 RBAKQ9NYW8 714 aaPredicted RBP14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 LSM7Q9UK45 103 aaKnown RBP14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 NOL7Q9UMY1 257 aaKnown RBP14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 RELNP78509 3460 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 A0A1W2PPC4 97 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 GOLGA8IPA6NC78 632 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 GOLGA8JA6NMD2 632 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 WNT9AO14904 365 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 USP12O75317 370 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 AFPP02771 609 aaKnown RBP14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 TMEM191BP0C7N4 346 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 GNL1P36915 607 aaPredicted RBP14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 SLC5A3P53794 718 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 ST3GAL1Q11201 340 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 CAMK2GQ13555 558 aaPredicted RBP14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 GNL2Q13823 731 aaKnown RBP14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 LINC00303Q3SY05 128 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 SFMBT2Q5VUG0 894 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 FYB2Q5VWT5 728 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 TMEM215Q68D42 235 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 KIAA0895LQ68EN5 471 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 PIWIL1Q96J94 861 aaKnown RBP14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 CDK5RAP3Q96JB5 506 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 C8orf76Q96K31 380 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 SNX25Q9H3E2 840 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 STARD5Q9NSY2 213 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 IL37Q9NZH6 218 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 CLEC4EQ9ULY5 219 aa14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 ANKRD17O75179 2603 aaKnown RBP14.43□□□□□ -0.1
EXOSC3-207ENST00000490516 FAM47DPA6NHR8 397 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 YKT6O15498 198 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 PENKP01210 267 aaPredicted RBP14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 PRPHP41219 470 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 LSSP48449 732 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 ARRB1P49407 418 aaPredicted RBP14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 RPS14P62263 151 aaKnown RBP14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 E2F1Q01094 437 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 GRIN1Q05586 938 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 POSTNQ15063 836 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 PROX2Q3B8N5 592 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 CCDC81Q6ZN84 652 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 Q6ZNB5 142 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 KANSL1Q7Z3B3 1105 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 ANKS1BQ7Z6G8 1248 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 OR5B17Q8NGF7 314 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 OR6B3Q8NGW1 331 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 NOC3LQ8WTT2 800 aaKnown RBP14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 SKA1Q96BD8 255 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 POLR1BQ9H9Y6 1135 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 GDF3Q9NR23 364 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 AASDHPPTQ9NRN7 309 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 THSD1Q9NS62 852 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 R3HCC1Q9Y3T6 440 aaKnown RBP14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 PAXBP1Q9Y5B6 917 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 BSNQ9UPA5 3926 aa14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 USP9YO00507 2555 aaPredicted RBP14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 TLN1Q9Y490 2541 aaKnown RBP14.42□□□□□ -0.1
EXOSC3-207ENST00000490516 A0A1W2PR77 199 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 FAM92AA1XBS5 289 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 MDM4O15151 490 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 DNTTP04053 509 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 KRT18P05783 430 aaKnown RBP14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 CR2P20023 1033 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 CD38P28907 300 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 ABCD1P33897 745 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 KCNA1Q09470 495 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 ANKRD1Q15327 319 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 KCTD17Q8N5Z5 321 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 SGK2Q9HBY8 427 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 OSER1Q9NX31 292 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 NUDT5Q9UKK9 219 aa14.41□□□□□ -0.1
EXOSC3-207ENST00000490516 CREBBPQ92793 2442 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 EPB41L2O43491 1005 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 ITGB6P18564 788 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 ATP5C1P36542 298 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 ARID5AQ03989 594 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 MCM6Q14566 821 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 KIF26BQ2KJY2 2108 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 FNDC3BQ53EP0 1204 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 CDCP2Q5VXM1 449 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 B3GALNT2Q8NCR0 500 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 ANKRD36BP1Q96IX9 119 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 GZF1Q9H116 711 aaPredicted RBP14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 ST6GALNAC4Q9H4F1 302 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 INTS13Q9NVM9 706 aa14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 TDRD6O60522 2096 aaKnown RBP14.4□□□□□ -0.1
EXOSC3-207ENST00000490516 DOCK9Q9BZ29 2069 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms