RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 ZNF484Q5JVG2 852 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TDRD10Q5VZ19 366 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 CDCA2Q69YH5 1023 aaPredicted RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 FAM117BQ6P1L5 589 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TTC27Q6P3X3 843 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 DCUN1D2Q6PH85 259 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TMEM270Q6UE05 265 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 CRELD2Q6UXH1 353 aaPredicted RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 SEPT14Q6ZU15 432 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 MON1BQ7L1V2 547 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TRMT1LQ7Z2T5 733 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 APBB1IPQ7Z5R6 666 aaPredicted RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ADAT2Q7Z6V5 191 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ERICH1Q86X53 443 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 NT5DC4Q86YG4 428 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 CCDC50Q8IVM0 306 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 C1orf210Q8IVY1 113 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ZSWIM2Q8NEG5 633 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ZNF417Q8TAU3 575 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ASAP3Q8TDY4 903 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 PRPF31Q8WWY3 499 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ZNF606Q8WXB4 792 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 CPA5Q8WXQ8 436 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 RAPGEF5Q92565 580 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TMEM143Q96AN5 459 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 CYFIP2Q96F07 1278 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ANKRD36BP1Q96IX9 119 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 CFAP57Q96MR6 1250 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 XPO6Q96QU8 1125 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ZNF587Q96SQ5 575 aaPredicted RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 YME1L1Q96TA2 773 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ACO2Q99798 780 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 SH2D3AQ9BRG2 576 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 KIFC3Q9BVG8 833 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TARS2Q9BW92 718 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 OSBPL8Q9BZF1 889 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 FAM117AQ9C073 453 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 NIF3L1Q9GZT8 377 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 AP5M1Q9H0R1 490 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 LHX5Q9H2C1 402 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 KDM4CQ9H3R0 1056 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 SMARCAD1Q9H4L7 1026 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 CYP3A43Q9HB55 503 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 IFT122Q9HBG6 1241 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 PPANQ9NQ55 473 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TRMT13Q9NUP7 481 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 INTS9Q9NV88 658 aaKnown RBP5.3□□□□□ -1.56
PTPRK-213ENST00000490332 SAMD15Q9P1V8 674 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 PCDHGA2Q9Y5H1 932 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 TEX15Q9BXT5 2789 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 PARP14Q460N5 1801 aa5.3□□□□□ -1.56
PTPRK-213ENST00000490332 ADGRA3Q8IWK6 1321 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 CNTNAP2Q9UHC6 1331 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 ACACAQ13085 2346 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 IGKV6-21A0A0C4DH24 114 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 SIGLEC16A6NMB1 481 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 ADARB2-AS1A8MUL3 147 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 H0YHG0 523 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 NOP56O00567 594 aaKnown RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 CAND2O75155 1236 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 CDH16O75309 829 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 ALBP02768 609 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 PRKCBP05771 671 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 TSHRP16473 764 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 DESP17661 470 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 UBA1P22314 1058 aaKnown RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 CTNNB1P35222 781 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 TCF7P36402 384 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 SSR1P43307 286 aaKnown RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 MARCKSL1P49006 195 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 ZNF132P52740 706 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 SLC18A1P54219 525 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 NOP14P78316 857 aaKnown RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 SP2Q02086 613 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 SP4Q02446 784 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 KRT17Q04695 432 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 PTPN11Q06124 597 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 LAMTOR4Q0VGL1 99 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 AUHQ13825 339 aaKnown RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 ZNF268Q14587 947 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 RASA2Q15283 850 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 STILQ15468 1287 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 FAM187BQ17R55 369 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 LACTB2Q53H82 288 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 CELF3Q5SZQ8 465 aaKnown RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 RNF187Q5TA31 235 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 TTC19Q6DKK2 380 aaPredicted RBP5.29□□□□□ -1.56
PTPRK-213ENST00000490332 DNAJC24Q6P3W2 148 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 RHBDF2Q6PJF5 856 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 C6orf89Q6UWU4 347 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 MPZL3Q6UWV2 235 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 PPP1R21Q6ZMI0 780 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 ARHGEF18Q6ZSZ5 1173 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 TSHZ1Q6ZSZ6 1077 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 GSTA5Q7RTV2 222 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 POLNQ7Z5Q5 900 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 ANKS1BQ7Z6G8 1248 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 SYT9Q86SS6 491 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 TLK2Q86UE8 772 aa5.29□□□□□ -1.56
PTPRK-213ENST00000490332 THNSL1Q8IYQ7 743 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms