RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 PENKP01210 267 aaPredicted RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 NR2F2P24468 414 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 MATKP42679 507 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 IL12RB1P42701 662 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 GCLMP48507 274 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 KIF11P52732 1056 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 MFAP3P55082 362 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 SCAPQ12770 1279 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 ACAP1Q15027 740 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 GEN1Q17RS7 908 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 ZNF394Q53GI3 561 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 DCAF12L1Q5VU92 463 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 ATL3Q6DD88 541 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 IL27RAQ6UWB1 636 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 INTS8Q75QN2 995 aaKnown RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 METTL3Q86U44 580 aaKnown RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 PNPLA1Q8N8W4 532 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 CADM4Q8NFZ8 388 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 DDI1Q8WTU0 396 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 TMEM174Q8WUU8 243 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 ADAMTS14Q8WXS8 1223 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 PAGE5Q96GU1 130 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 HEXIM2Q96MH2 286 aaKnown RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 NUP58Q9BVL2 599 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 CCDC86Q9H6F5 360 aaKnown RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 ITM2CQ9NQX7 267 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 WSB2Q9NYS7 404 aaPredicted RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 MARCH2Q9P0N8 246 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 USP36Q9P275 1121 aaKnown RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 THAP10Q9P2Z0 257 aaPredicted RBP10.9□□□□□ -0.66
CHKB-211ENST00000489453 USP25Q9UHP3 1055 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 NFE2L3Q9Y4A8 694 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 DMXL2Q8TDJ6 3036 aa10.9□□□□□ -0.66
CHKB-211ENST00000489453 ACACAQ13085 2346 aa10.9□□□□□ -0.67
CHKB-211ENST00000489453 CABIN1Q9Y6J0 2220 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 SLC12A8A0AV02 714 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 FAM221BA6H8Z2 402 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 MAPK13O15264 365 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 BCAT2O15382 392 aaPredicted RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 ACTN4O43707 911 aaKnown RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 CILPO75339 1184 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 MYL1P05976 194 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 EPHX1P07099 455 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 TRIM49P0CI25 452 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 TRIM49CP0CI26 452 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 HOXB3P14651 431 aaPredicted RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 RPL13P26373 211 aaKnown RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 TPMTP51580 245 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 ZNF234Q14588 700 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 EIF4HQ15056 248 aaKnown RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 FNDC3BQ53EP0 1204 aaKnown RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 PPP1R26Q5T8A7 1209 aaPredicted RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 FYB2Q5VWT5 728 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 SERPINA13PQ6UXR4 307 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 SCD5Q86SK9 330 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 FAM124AQ86V42 546 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 PROSER1Q86XN7 944 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 TMPRSS6Q8IU80 811 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 DENND1CQ8IV53 801 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 FAM186BQ8IYM0 893 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 TTC39CQ8N584 583 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 TAS1R2Q8TE23 839 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 DNASE2BQ8WZ79 361 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 GAREM1Q9H706 876 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 ELOVL2Q9NXB9 296 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 FBXO10Q9UK96 956 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 AGO1Q9UL18 857 aaKnown RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 DSPP15924 2871 aaKnown RBP10.89□□□□□ -0.67
CHKB-211ENST00000489453 KNL1Q8NG31 2342 aa10.89□□□□□ -0.67
CHKB-211ENST00000489453 TIMM44O43615 452 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 GJB3O75712 270 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 KLKB1P03952 638 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 PRKCHP24723 683 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 PSMC2P35998 433 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 HARS2P49590 506 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 YWHAGP61981 247 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHKB-211ENST00000489453 SUZ12Q15022 739 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 TEAD4Q15561 434 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 CPXM2Q8N436 756 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 ENGASEQ8NFI3 743 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 PLD4Q96BZ4 506 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 SLC2A11Q9BYW1 496 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 MKRN2Q9H000 416 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 APOBEC3GQ9HC16 384 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 TMEM8AQ9HCN3 771 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 TM7SF3Q9NS93 570 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 OLA1Q9NTK5 396 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 NYNRINQ9P2P1 1898 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 EIF2B4Q9UI10 523 aaKnown RBP10.88□□□□□ -0.67
CHKB-211ENST00000489453 PCOLCE2Q9UKZ9 415 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 USP3Q9Y6I4 520 aa10.88□□□□□ -0.67
CHKB-211ENST00000489453 PLXNA2O75051 1894 aa10.87□□□□□ -0.67
CHKB-211ENST00000489453 A0A1B0GVL5 298 aa10.87□□□□□ -0.67
CHKB-211ENST00000489453 GOLGA8CPA6NN73 597 aa10.87□□□□□ -0.67
CHKB-211ENST00000489453 METTL12A8MUP2 240 aa10.87□□□□□ -0.67
CHKB-211ENST00000489453 KCNJ18B7U540 433 aa10.87□□□□□ -0.67
CHKB-211ENST00000489453 FLRT2O43155 660 aa10.87□□□□□ -0.67
CHKB-211ENST00000489453 STX10O60499 249 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms