RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 DCBLD1Q8N8Z6 715 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 SYT2Q8N9I0 419 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 SNRNP27Q8WVK2 155 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 KBTBD7Q8WVZ9 684 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 BHMTQ93088 406 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 BIRC7Q96CA5 298 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PCED1BQ96HM7 432 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 C8orf48Q96LL4 319 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 SLITRK1Q96PX8 696 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PLIN2Q99541 437 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 DUSP9Q99956 384 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 ORAI3Q9BRQ5 295 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CCSER2Q9H7U1 834 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 GDAP2Q9NXN4 497 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 EHD2Q9NZN4 543 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 LARSQ9P2J5 1176 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 AGO2Q9UKV8 859 aaKnown RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 CDH9Q9ULB4 789 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 PCDHB1Q9Y5F3 818 aa9.73□□□□□ -0.85
SSBP1-212ENST00000489378 HEMK1Q9Y5R4 338 aaPredicted RBP9.73□□□□□ -0.85
SSBP1-212ENST00000489378 NBASA2RRP1 2371 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 KLK10O43240 276 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 PDGFRBP09619 1106 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 ACADMP11310 421 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 NFKB2Q00653 900 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 INSM1Q01101 510 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-212ENST00000489378 ORC1Q13415 861 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 ENPP2Q13822 863 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 HECTD3Q5T447 861 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 KDM7AQ6ZMT4 941 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 DHX40Q8IX18 779 aaKnown RBP9.72□□□□□ -0.85
SSBP1-212ENST00000489378 LRRC52Q8N7C0 313 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 NSUN7Q8NE18 718 aaKnown RBP9.72□□□□□ -0.85
SSBP1-212ENST00000489378 SAP25Q8TEE9 199 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 KCNE4Q8WWG9 221 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 PLK2Q9NYY3 685 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 MARK1Q9P0L2 795 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 WDR35Q9P2L0 1181 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 THAP10Q9P2Z0 257 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-212ENST00000489378 CHORDC1Q9UHD1 332 aaPredicted RBP9.72□□□□□ -0.85
SSBP1-212ENST00000489378 CLCA2Q9UQC9 943 aa9.72□□□□□ -0.85
SSBP1-212ENST00000489378 PTPRJQ12913 1337 aa9.71□□□□□ -0.85
SSBP1-212ENST00000489378 RELNP78509 3460 aa9.71□□□□□ -0.85
SSBP1-212ENST00000489378 PLXNA2O75051 1894 aa9.71□□□□□ -0.85
SSBP1-212ENST00000489378 DFNA5O60443 496 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 SYNCRIPO60506 623 aaKnown RBP9.71□□□□□ -0.86
SSBP1-212ENST00000489378 TSPAN3O60637 253 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 FSBPO95073 299 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 IL18RAPO95256 599 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 MPOP05164 745 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ITGAVP06756 1048 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 KRT19P08727 400 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 PLA2G4BP0C869 781 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 GP1BBP13224 206 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ACO1P21399 889 aaKnown RBP9.71□□□□□ -0.86
SSBP1-212ENST00000489378 PRKCHP24723 683 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 CD27P26842 260 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 YWHAQP27348 245 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 IRX6P78412 446 aaPredicted RBP9.71□□□□□ -0.86
SSBP1-212ENST00000489378 GEN1Q17RS7 908 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 MDH1BQ5I0G3 518 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ZNF574Q6ZN55 896 aaPredicted RBP9.71□□□□□ -0.86
SSBP1-212ENST00000489378 HTR3DQ70Z44 454 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ADAT2Q7Z6V5 191 aaKnown RBP9.71□□□□□ -0.86
SSBP1-212ENST00000489378 NT5DC4Q86YG4 428 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 CACTIN-AS1Q8N1I8 211 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 MYCT1Q8N699 235 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 CSGALNACT2Q8N6G5 542 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 EXD3Q8N9H8 876 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ZSWIM2Q8NEG5 633 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 MYCBPAPQ8TBZ2 947 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 RFFLQ8WZ73 363 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 FBXO32Q969P5 355 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ZNF578Q96N58 590 aaPredicted RBP9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ELF4Q99607 663 aaPredicted RBP9.71□□□□□ -0.86
SSBP1-212ENST00000489378 REEP2Q9BRK0 252 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 SIX4Q9UIU6 781 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 NME7Q9Y5B8 376 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 STYXL1Q9Y6J8 313 aa9.71□□□□□ -0.86
SSBP1-212ENST00000489378 ABCA12Q86UK0 2595 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 VILLO15195 856 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 REC8O95072 547 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 SEMA4FO95754 770 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 ABCB4P21439 1286 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 PGFP49763 221 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 ZNF132P52740 706 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 C21orf59P57076 290 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 POU5F1Q01860 360 aaKnown RBP9.7□□□□□ -0.86
SSBP1-212ENST00000489378 MAPRE1Q15691 268 aaKnown RBP9.7□□□□□ -0.86
SSBP1-212ENST00000489378 HS2ST1Q7LGA3 356 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 PDZD8Q8NEN9 1154 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 SCAMP5Q8TAC9 235 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 SORCS1Q8WY21 1168 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 GTF3C6Q969F1 213 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 SLC6A18Q96N87 628 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 FIZ1Q96SL8 496 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 RAB34Q9BZG1 259 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms