RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 PSMA2P25787 234 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 DHX9Q08211 1270 aaKnown RBP18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 PARP6Q2NL67 630 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 MDH1BQ5I0G3 518 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 KAZNQ674X7 775 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 TRNP1Q6NT89 227 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 FAM126BQ8IXS8 530 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 SLC43A3Q8NBI5 491 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 DBF4BQ8NFT6 615 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 DDX23Q9BUQ8 820 aaKnown RBP18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 DDX43Q9NXZ2 648 aaKnown RBP18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 TMEM59LQ9UK28 342 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 GIT1Q9Y2X7 761 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 MIF4GDA9UHW6 222 aaKnown RBP18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 NDUFB5O43674 189 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 CCNB1P14635 433 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 LRPAP1P30533 357 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 KCNJ1P48048 391 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 C15orf59Q2T9L4 293 aaPredicted RBP18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 FAM26DQ5JW98 314 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 SEL1L2Q5TEA6 688 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 MAP7D3Q8IWC1 876 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 C1orf54Q8WWF1 131 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 BHMTQ93088 406 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 SIKE1Q9BRV8 207 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 ZNF518BQ9C0D4 1074 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 PAK6Q9NQU5 681 aaPredicted RBP18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 NMRK1Q9NWW6 199 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 GDAP2Q9NXN4 497 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 GGT7Q9UJ14 662 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 TRIM33Q9UPN9 1127 aa18.86■□□□□ 0.61
POLR2J3-205ENST00000489144 KRT10P13645 584 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 ADARP55265 1226 aaKnown RBP18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 KPNB1Q14974 876 aaKnown RBP18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 UPP1Q16831 310 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 LIN52Q52LA3 116 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 CLLU1OSQ5K130 101 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 GRAMD4Q6IC98 578 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 DEFB128Q7Z7B8 93 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 MRPL10Q7Z7H8 261 aaKnown RBP18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 ARFGAP1Q8N6T3 406 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 B3GALNT2Q8NCR0 500 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 ATXN2LQ8WWM7 1075 aaKnown RBP18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 TLCD1Q96CP7 247 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 CENPKQ9BS16 269 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 PFDN4Q9NQP4 134 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 SCN5AQ14524 2016 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 CHN1P15882 459 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 PBX3P40426 434 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 UTP4Q969X6 686 aaKnown RBP18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 CCDC134Q9H6E4 229 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 FAM114A2Q9NRY5 505 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 RNF14Q9UBS8 474 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 HESX1Q9UBX0 185 aa18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 PRG3Q9Y2Y8 225 aaPredicted RBP18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 USP15Q9Y4E8 981 aaPredicted RBP18.85■□□□□ 0.61
POLR2J3-205ENST00000489144 DDHD2O94830 711 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 OAS1P00973 400 aaKnown RBP18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 FLT3P36888 993 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 VHLP40337 213 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 PNPLA4P41247 253 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 CFAP61Q8NHU2 1237 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 TMEM209Q96SK2 561 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 DNAJB4Q9UDY4 337 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 ITM2BQ9Y287 266 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 TDRD15B5MCY1 1934 aaKnown RBP18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 MYBPHLA2RUH7 354 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 CES2O00748 559 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 ALDH2P05091 517 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 PORP16435 677 aaPredicted RBP18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 TFE3P19532 575 aaPredicted RBP18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 CTNNA2P26232 953 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 MTMR3Q13615 1198 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 TTC27Q6P3X3 843 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 CFAP57Q96MR6 1250 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 MED10Q9BTT4 135 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 DPH5Q9H2P9 285 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 SLC38A7Q9NVC3 462 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 ARHGEF38Q9NXL2 777 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 IP6K2Q9UHH9 426 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 RABL2BQ9UNT1 228 aa18.84■□□□□ 0.61
POLR2J3-205ENST00000489144 CDH23Q9H251 3354 aa18.83■□□□□ 0.61
POLR2J3-205ENST00000489144 RALAP11233 206 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 IL1R2P27930 398 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 CDK7P50613 346 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 GEMIN4P57678 1058 aaKnown RBP18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 OCRLQ01968 901 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 ZNF598Q86UK7 904 aaKnown RBP18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 PRELID2Q8N945 189 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 CRTAC1Q9NQ79 661 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 TMEM30AQ9NV96 361 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 C9IYK1 514 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 ZNF623O75123 536 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 SELPP16109 830 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 CYP2C18P33260 490 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 GSTA3Q16772 222 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 TMEM259Q4ZIN3 620 aa18.83■□□□□ 0.6
POLR2J3-205ENST00000489144 PKDCCQ504Y2 493 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms