RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 KMT2BQ9UMN6 2715 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC12-221ENST00000489032 VPS13AQ96RL7 3174 aa8.75□□□□□ -1.01
TRAPPC12-221ENST00000489032 A0A1B0GVL5 298 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 K7ERI5 159 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 ENO2P09104 434 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 STAG3L1P0CL83 205 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 PFKFB1P16118 471 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 SCP2P22307 547 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 AXLP30530 894 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 DEKP35659 375 aaKnown RBP8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 PEX3P56589 373 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 DLX2Q07687 328 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 MAPK6Q16659 721 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 RNF219Q5W0B1 726 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 VASNQ6EMK4 673 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 TWF2Q6IBS0 349 aaKnown RBP8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 APBB1IPQ7Z5R6 666 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 CCDC65Q8IXS2 484 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 ZZZ3Q8IYH5 903 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 MYOCDQ8IZQ8 938 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 MYCT1Q8N699 235 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 HIPK4Q8NE63 616 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 DLG3Q92796 817 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 ADAM2Q99965 735 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 REEP2Q9BRK0 252 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 IFT122Q9HBG6 1241 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 SPTLC3Q9NUV7 552 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 CD207Q9UJ71 328 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 PIN4Q9Y237 131 aaKnown RBP8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 PCDHA5Q9Y5H7 936 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 TCHHQ07283 1943 aa8.74□□□□□ -1.01
TRAPPC12-221ENST00000489032 NLRC5Q86WI3 1866 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 LOC730098B7Z3J9 87 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 ACOT7O00154 380 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 NEMP1O14524 444 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 ULK1O75385 1050 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 CSDE1O75534 798 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 LRG1P02750 347 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 C4BPAP04003 597 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 PRKCBP05771 671 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 IDEP14735 1019 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 BPIP17213 487 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 GAP43P17677 238 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 CDK11BP21127 795 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 FGFR4P22455 802 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 MC3RP41968 323 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 NPTX2P47972 431 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 DLG4P78352 724 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 TMPRSS15P98073 1019 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 MBTD1Q05BQ5 628 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 GIT2Q14161 759 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 NOTUMQ6P988 496 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 SLC24A5Q71RS6 500 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 FRMD5Q7Z6J6 570 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 HACE1Q8IYU2 909 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 CNNM3Q8NE01 707 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 WDR48Q8TAF3 677 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 ERCC4Q92889 916 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 CCDC47Q96A33 483 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 RMDN1Q96DB5 314 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 CCDC51Q96ER9 411 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 TRIM6Q9C030 488 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 POLD4Q9HCU8 107 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 RGS18Q9NS28 235 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 AGPAT5Q9NUQ2 364 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 H2AFY2Q9P0M6 372 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 SEL1LQ9UBV2 794 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 HOOK1Q9UJC3 728 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 PLA2G2DQ9UNK4 145 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 PCDHB7Q9Y5E2 793 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 IRAK3Q9Y616 596 aa8.73□□□□□ -1.01
TRAPPC12-221ENST00000489032 EPG5Q9HCE0 2579 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 DMXL1Q9Y485 3027 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 MICAL3Q7RTP6 2002 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 FAM237AA0A1B0GTK4 181 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 MYMKA6NI61 221 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 K7ENM7 598 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 ZNF202O95125 648 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 MBD3O95983 291 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 MYL1P05976 194 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 SDHAP31040 664 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 SARSP49591 514 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 RAB27AP51159 221 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 NDUFA8P51970 172 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 ASIC1P78348 528 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 HTRA4P83105 476 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 HYAL1Q12794 435 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 PRPF4BQ13523 1007 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 PUM1Q14671 1186 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 STAT4Q14765 748 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 FAM187BQ17R55 369 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 KLHL40Q2TBA0 621 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 CR1LQ2VPA4 569 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 STXBP4Q6ZWJ1 553 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 DAW1Q8N136 415 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 FAM26EQ8N5C1 309 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 LRRC15Q8TF66 581 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 E2F7Q96AV8 911 aa8.72□□□□□ -1.01
TRAPPC12-221ENST00000489032 PGBD4Q96DM1 585 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms