RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 IQCB1Q15051 598 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 PTPN20Q4JDL3 420 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 HEATR6Q6AI08 1181 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 TOGARAM2Q6ZUX3 1019 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 NOP9Q86U38 636 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 TERB1Q8NA31 727 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 IL17RCQ8NAC3 791 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 BHMTQ93088 406 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 FAM149B1Q96BN6 582 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC39A13Q96H72 371 aa16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 XPO6Q96QU8 1125 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 RIF1Q5UIP0 2472 aaKnown RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 PTPRZ1P23471 2315 aaPredicted RBP16.63■□□□□ 0.25
CTDSP1-209ENST00000488627 PRRT4C9JH25 899 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 LATS1O95835 1130 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 IGLV3-25P01717 112 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 HNRNPLP14866 589 aaKnown RBP eCLIP16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 PXNP49023 591 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 ZNF165P49910 485 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 YWHAZP63104 245 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 PITX1P78337 314 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 UBXN1Q04323 297 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 GRAMD4Q6IC98 578 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 WDR5BQ86VZ2 330 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 LONP2Q86WA8 852 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 CCDC33Q8N5R6 958 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 CAMKK1Q8N5S9 505 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 EPS8L1Q8TE68 723 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 GOLGA1Q92805 767 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 ACDQ96AP0 544 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 FCRL2Q96LA5 508 aaPredicted RBP16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 EPC1Q9H2F5 836 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 POPDC2Q9HBU9 364 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 NOCTQ9UK39 431 aaKnown RBP16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 CLEC4EQ9ULY5 219 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC8A2Q9UPR5 921 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 STARD13Q9Y3M8 1113 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 DAAM1Q9Y4D1 1078 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 MYO16Q9Y6X6 1858 aa16.62■□□□□ 0.25
CTDSP1-209ENST00000488627 MYOFQ9NZM1 2061 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 CCDC163A0A0D9SF12 145 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 SYCE3A1L190 88 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 SMTNL1A8MU46 457 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 ADAM23O75077 832 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 GLI1P08151 1106 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 TIE1P35590 1138 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 SOX5P35711 763 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 TBX4P57082 545 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 SRSF5Q13243 272 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 NNTQ13423 1086 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 HSF5Q4G112 596 aaPredicted RBP16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 PREPLQ4J6C6 727 aaPredicted RBP16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 ADGRF1Q5T601 910 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 TAF3Q5VWG9 929 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 OLFML1Q6UWY5 402 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 TMEM92Q6UXU6 159 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 TAC4Q86UU9 113 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 ALLCQ8N6M5 410 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 TXNDC5Q8NBS9 432 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 ADAM32Q8TC27 787 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 KCNV2Q8TDN2 545 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 AZIN2Q96A70 460 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 NOX5Q96PH1 765 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC2A13Q96QE2 648 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 HHIPQ96QV1 700 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 NLRC4Q9NPP4 1024 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 ASNSD1Q9NWL6 643 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 MMP17Q9ULZ9 603 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 TLR6Q9Y2C9 796 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC27A6Q9Y2P4 619 aa16.61■□□□□ 0.25
CTDSP1-209ENST00000488627 GOLGA6L7A0A1B0GV03 622 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 SGK1O00141 431 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 TEX33O43247 280 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 GFPT2O94808 682 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 KLF8O95600 359 aaPredicted RBP16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 MMEP08473 750 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 CHRNB2P17787 502 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 GABRB2P47870 512 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 DGKGP49619 791 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 CRY1Q16526 586 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 FAM133BQ5BKY9 247 aaKnown RBP16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 EFHC1Q5JVL4 640 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 C10orf76Q5T2E6 689 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 NUGGCQ68CJ6 796 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 NADSYN1Q6IA69 706 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 FAM183BPQ6ZVS7 135 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 DEFB106AQ8N104 65 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 TMEM35BQ8NCS4 154 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 SLC20A1Q8WUM9 679 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 SERPINB11Q96P15 392 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 TRIM62Q9BVG3 475 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 ZDHHC4Q9NPG8 344 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
CTDSP1-209ENST00000488627 CAPN9O14815 690 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 IRAK2O43187 625 aa16.59■□□□□ 0.25
CTDSP1-209ENST00000488627 ACSL4O60488 711 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms