RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 MTF1Q14872 753 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 ACAP1Q15027 740 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 TCEAL1Q15170 157 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 CCDC14Q49A88 953 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 NUGGCQ68CJ6 796 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 CC2D1AQ6P1N0 951 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-207ENST00000487645 SND1Q7KZF4 910 aaKnown RBP eCLIP13.86□□□□□ -0.19
COL4A6-207ENST00000487645 STRADAQ7RTN6 431 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 RNF135Q8IUD6 432 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 ADAM32Q8TC27 787 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 ARHGEF26Q96DR7 871 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 CFAP57Q96MR6 1250 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 MCEEQ96PE7 176 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 TBCBQ99426 244 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 PACSIN1Q9BY11 444 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 FAM204AQ9H8W3 233 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 TRPV5Q9NQA5 729 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 DDIT4Q9NX09 232 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 SLC12A6Q9UHW9 1150 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 LCMT1Q9UIC8 334 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 PAXBP1Q9Y5B6 917 aa13.86□□□□□ -0.19
COL4A6-207ENST00000487645 MSI1O43347 362 aaKnown RBP13.85□□□□□ -0.19
COL4A6-207ENST00000487645 SLC34A2O95436 690 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 KLKB1P03952 638 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 ASGR2P07307 311 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 HMBSP08397 361 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 IRF1P10914 325 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 CCR1P32246 355 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 CXCR3P49682 368 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 SULT1E1P49888 294 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 NME3Q13232 169 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 PPP2R5DQ14738 602 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 PDGFRLQ15198 375 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 BRMS1LQ5PSV4 323 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 Q6ZNB5 142 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 RHOT2Q8IXI1 618 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 ADGRG2Q8IZP9 1017 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 TXLNBQ8N3L3 684 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 ST13P5Q8NFI4 369 aaPredicted RBP13.85□□□□□ -0.19
COL4A6-207ENST00000487645 RIN3Q8TB24 985 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 OSCP1Q8WVF1 389 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 IRF7Q92985 503 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 FCRL2Q96LA5 508 aaPredicted RBP13.85□□□□□ -0.19
COL4A6-207ENST00000487645 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 FAM83CQ9BQN1 747 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 NUP85Q9BW27 656 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 WDCPQ9H6R7 721 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 DUS2Q9NX74 493 aaKnown RBP13.85□□□□□ -0.19
COL4A6-207ENST00000487645 SORCS3Q9UPU3 1222 aa13.85□□□□□ -0.19
COL4A6-207ENST00000487645 TICRRQ7Z2Z1 1910 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 KCNU1A8MYU2 1149 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 MYO1FO00160 1098 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 RNF8O76064 485 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 MTA2O94776 668 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 PTMAP06454 111 aaKnown RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 SRFP11831 508 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 TFE3P19532 575 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 CORO1AP31146 461 aaKnown RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 GDI1P31150 447 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 RDXP35241 583 aaKnown RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 CHKAP35790 457 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 SLC11A2P49281 568 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 ATP11AP98196 1134 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 CCDC173Q0VFZ6 552 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 GRM2Q14416 872 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 PIGHQ14442 188 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 C15orf59Q2T9L4 293 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 ZC3H12AQ5D1E8 599 aaKnown RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 ACBD5Q5T8D3 534 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 OTUD1Q5VV17 481 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 UBALD2Q8IYN6 164 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 ATP6V0D2Q8N8Y2 350 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 TTC16Q8NEE8 873 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 SLC35G2Q8TBE7 412 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 ATP2A3Q93084 1043 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 RNF34Q969K3 372 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 WBP2Q969T9 261 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 BTN2A3PQ96KV6 586 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 CALR3Q96L12 384 aaKnown RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 UHRF1Q96T88 793 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 ADAM33Q9BZ11 813 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 IRX2Q9BZI1 471 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 LINC00597Q9H2U6 94 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 BRD9Q9H8M2 597 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 CD320Q9NPF0 282 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 SLC2A4RGQ9NR83 387 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 PIGVQ9NUD9 493 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 CALCOCO1Q9P1Z2 691 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 CTTNBP2NLQ9P2B4 639 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 IP6K2Q9UHH9 426 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 STOML2Q9UJZ1 356 aa13.84□□□□□ -0.19
COL4A6-207ENST00000487645 AGO1Q9UL18 857 aaKnown RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 REXO2Q9Y3B8 237 aaKnown RBP13.84□□□□□ -0.19
COL4A6-207ENST00000487645 A0A0A6YYK5 440 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-207ENST00000487645 BTNL10A8MVZ5 291 aa13.83□□□□□ -0.2
COL4A6-207ENST00000487645 APOEP02649 317 aa13.83□□□□□ -0.2
COL4A6-207ENST00000487645 PSMA2P25787 234 aa13.83□□□□□ -0.2
COL4A6-207ENST00000487645 ARHGAP25P42331 645 aa13.83□□□□□ -0.2
COL4A6-207ENST00000487645 IFNAR2P48551 515 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms