RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 SPATA31A1Q5TZJ5 1347 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 IGKV6D-41A0A0C4DH26 115 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 TPP1O14773 563 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 ASLP04424 464 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PRKCBP05771 671 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 STRIP1Q5VSL9 837 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 APOBEC3HQ6NTF7 200 aaKnown RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 EEPD1Q7L9B9 569 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 RAB44Q7Z6P3 723 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 IFNEQ86WN2 208 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 RYBPQ8N488 228 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 DCAKDQ8WVC6 231 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 EXT2Q93063 718 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PRR11Q96HE9 360 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 VPS39Q96JC1 886 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 ZBTB45Q96K62 511 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 ADNPQ9H2P0 1102 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 TLE6Q9H808 572 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 WDR41Q9HAD4 459 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 RABL2BQ9UNT1 228 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 TMX2Q9Y320 296 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 COQ4Q9Y3A0 265 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 A0A087WXM4 84 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 WDR27A2RRH5 827 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 RAD17O75943 681 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 TMEM63AO94886 807 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 CYP1A1P04798 512 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 ICAM1P05362 532 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 IMPDH2P12268 514 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 ITGB5P18084 799 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 GDF10P55107 478 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 IL1RL1Q01638 556 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SHROOM1Q2M3G4 852 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SFT2D3Q587I9 215 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PLEKHG4Q58EX7 1191 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 C1QTNF12Q5T7M4 302 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SNRNP48Q6IEG0 339 aaKnown RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 C15orf52Q6ZUT6 534 aaKnown RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 NANOGNBQ7Z5D8 188 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 NLGN1Q8N2Q7 840 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PCYOX1LQ8NBM8 494 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 WRNIP1Q96S55 665 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PPP1R16BQ96T49 567 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SYT11Q9BT88 431 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SPC25Q9HBM1 224 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 CLUHO75153 1309 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 DCAF8L1A6NGE4 600 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SIGLEC16A6NMB1 481 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 BHMG1C9JSJ3 638 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 OR6B1O95007 311 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 CSPG5O95196 566 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 APOA4P06727 396 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PABPC4LP0CB38 370 aaKnown RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 NELFEP18615 380 aaKnown RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 FGFR3P22607 806 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 GP5P40197 560 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 MLH1P40692 756 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 GABRB2P47870 512 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 GLRBP48167 497 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 CBX3Q13185 183 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 LSAMPQ13449 338 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 CCDC153Q494R4 210 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 NADK2Q4G0N4 442 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 DPY19L2Q6NUT2 758 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 STRA8Q7Z7C7 330 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 AMIGO2Q86SJ2 522 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 TMEM110Q86TL2 294 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PDSS2Q86YH6 399 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 DIS3LQ8TF46 1054 aaKnown RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 HERPUD2Q9BSE4 406 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 MED10Q9BTT4 135 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 BEGAINQ9BUH8 593 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 ZNF395Q9H8N7 513 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 IL1RL2Q9HB29 575 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 LRRC4Q9HBW1 653 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 ZNF277Q9NRM2 450 aaPredicted RBP7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 MRGBPQ9NV56 204 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SEPT3Q9UH03 358 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 PLIN4Q96Q06 1357 aa7.88□□□□□ -1.15
COL6A4P1-202ENST00000487147 SAC3D1A6NKF1 404 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 E2F6O75461 281 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 HSPA1AP0DMV8 641 aaKnown RBP7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 HSPA1BP0DMV9 641 aaKnown RBP7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 ACAT1P24752 427 aaKnown RBP7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 CRHR1P34998 444 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 GAD2Q05329 585 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 MMRN1Q13201 1228 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 KLF1Q13351 362 aaPredicted RBP7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 PEX6Q13608 980 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 C6orf52Q5T4I8 152 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 CYP2R1Q6VVX0 501 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 ADCY4Q8NFM4 1077 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 TFB1MQ8WVM0 346 aaKnown RBP7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 SGF29Q96ES7 293 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 WRAP73Q9P2S5 460 aaPredicted RBP7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 ZNF229Q9UJW7 825 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 RAB26Q9ULW5 256 aa7.87□□□□□ -1.15
COL6A4P1-202ENST00000487147 POLIQ9UNA4 740 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms