RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DGKIO75912 1065 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 AMPD1P23109 780 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 ARL4AP40617 200 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 SLC25A52Q3SY17 297 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 LGSNQ5TDP6 509 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 PIGZQ86VD9 579 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 TOP6BLQ8N6T0 577 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 B3GALNT2Q8NCR0 500 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 OLFM3Q96PB7 478 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 RAB3IPQ96QF0 476 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 HNRNPABQ99729 332 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 EBNA1BP2Q99848 306 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 XAB2Q9HCS7 855 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 SMYD2Q9NRG4 433 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 IPPQ9Y573 584 aa18.6■□□□□ 0.57
PDLIM7-207ENST00000486828 COPEO14579 308 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 DAB1O75553 588 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 GOT1P17174 413 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 SULT1E1P49888 294 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 PLEKHG4Q58EX7 1191 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 OLFML2BQ68BL8 750 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 OSTM1Q86WC4 334 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 CEP57Q86XR8 500 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 PSTKQ8IV42 348 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 DEFB106AQ8N104 65 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 PYROXD2Q8N2H3 581 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 GSDMBQ8TAX9 411 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 TFB1MQ8WVM0 346 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 SRPK1Q96SB4 655 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 TSSK1BQ9BXA7 367 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 PRDM16Q9HAZ2 1276 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 STK38LQ9Y2H1 464 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 CRYBB1P53674 252 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 LILRA4P59901 499 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 ADIGQ0VDE8 80 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 PARP6Q2NL67 630 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 DEFB115Q30KQ5 88 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 MORN1Q5T089 497 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 BZW1Q7L1Q6 419 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 FAM131BQ86XD5 332 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 CCDC33Q8N5R6 958 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 SMG8Q8ND04 991 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 HTR3CQ8WXA8 447 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 INPP5DQ92835 1189 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 TTC17Q96AE7 1141 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 LENG1Q96BZ8 264 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 DUSP16Q9BY84 665 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 TRIM55Q9BYV6 548 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 MFHAS1Q9Y4C4 1052 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 MAD1L1Q9Y6D9 718 aa18.59■□□□□ 0.57
PDLIM7-207ENST00000486828 MANSC4A6NHS7 340 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 FAM159BA6NKW6 160 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 IL1BP01584 269 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 ZNF865P0CJ78 1059 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 VAV1P15498 845 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 TARSP26639 723 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 CCNFP41002 786 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 SLC8A3P57103 927 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 OVGP1Q12889 678 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 MAP2K5Q13163 448 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 PRKD1Q15139 912 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 ARRDC4Q8NCT1 418 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 RFWD2Q8NHY2 731 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 FAM149B1Q96BN6 582 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 MTBPQ96DY7 904 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 IQCGQ9H095 443 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 MKS1Q9NXB0 559 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 KANSL3Q9P2N6 904 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 ZFP69BQ9UJL9 534 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 PCDHA11Q9Y5I1 949 aa18.58■□□□□ 0.56
PDLIM7-207ENST00000486828 A0A0A0MRY4 1105 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 KRT38O76015 456 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 TGDSO95455 350 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 CSH1P0DML2 217 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 CSH2P0DML3 217 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 T-ENOLP0DO92 83 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 LRPAP1P30533 357 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 FDFT1P37268 417 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 SERPINB4P48594 390 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 MRPS5P82675 430 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 SARNPP82979 210 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 ANKRD20A2Q5SQ80 823 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 ANKRD20A1Q5TYW2 823 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 ANKRD20A3Q5VUR7 823 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 OTUD1Q5VV17 481 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 BNIPLQ7Z465 357 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 HACE1Q8IYU2 909 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 MPP5Q8N3R9 675 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 NT5C3BQ969T7 300 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 SPATA13Q96N96 652 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 TMEM237Q96Q45 408 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 ARHGEF4Q9NR80 690 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 FLRT1Q9NZU1 646 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 HAO1Q9UJM8 370 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 A8MUI8 341 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 KLF11O14901 512 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 RFPL1O75677 317 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 MYL3P08590 195 aa18.57■□□□□ 0.56
PDLIM7-207ENST00000486828 EZRP15311 586 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms