RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 VNN1O95497 513 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 APOEP02649 317 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 C4BPAP04003 597 aaKnown RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 MYL4P12829 197 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 TNNI1P19237 187 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 EPHA3P29320 983 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 PRDX6P30041 224 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 YWHABP31946 246 aaKnown RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 ACADVLP49748 655 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SCNN1DP51172 638 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 THOP1P52888 689 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SLC5A3P53794 718 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SPIDRQ14159 915 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 NRF1Q16656 503 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF423Q2M1K9 1284 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 ZFP1Q6P2D0 407 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 TRMT10BQ6PF06 316 aaKnown RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 NPNTQ6UXI9 565 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 UBR7Q8N806 425 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 GMCL1Q96IK5 515 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 WRNIP1Q96S55 665 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 RIT2Q99578 217 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 NUF2Q9BZD4 464 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SLC38A7Q9NVC3 462 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 NR2E3Q9Y5X4 410 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 COL5A3P25940 1745 aaPredicted RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 NRAPQ86VF7 1730 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 PRSS51A0A1B0GVH4 220 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 H0YIN7 160 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 MATN2O00339 956 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 CHADO15335 359 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 KLHL41O60662 606 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 CALB1P05937 261 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF26P17031 533 aaPredicted RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 ATP2B4P23634 1241 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 NUDT2P50583 147 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SPP2Q13103 211 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 TAZQ16635 292 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 ZACNQ401N2 412 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 N4BP2L1Q5TBK1 243 aaPredicted RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 CYP4A22Q5TCH4 519 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 DARS2Q6PI48 645 aaKnown RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 CAND1Q86VP6 1230 aaKnown RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 C10orf107Q8IVU9 208 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 THNSL1Q8IYQ7 743 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 KIAA0319LQ8IZA0 1049 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 NIPA2Q8N8Q9 360 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 TMEM102Q8N9M5 508 aaPredicted RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 GMCL1P1Q8NEA9 526 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 BHLHE22Q8NFJ8 381 aaPredicted RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 SPATA18Q8TC71 538 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 PPP1R10Q96QC0 940 aaKnown RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 PAIP1Q9H074 479 aaKnown RBP10.97□□□□□ -0.65
CCDC171-208ENST00000486641 RAB6BQ9NRW1 208 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 POLLQ9UGP5 575 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 PTPRJQ12913 1337 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 CNTNAP2Q9UHC6 1331 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 H3BNH8 94 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 TMX2-CTNND1H3BSU7 103 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 NOP56O00567 594 aaKnown RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 MCF2LO15068 1137 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 XPOTO43592 962 aaKnown RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 LRCH4O75427 683 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 GDF11O95390 407 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 SERPINB2P05120 415 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 ITGB5P18084 799 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 PSMA2P25787 234 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 RFC1P35251 1148 aaPredicted RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 QARSP47897 775 aaKnown RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 PKNOX1P55347 436 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 SOX10P56693 466 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 CTBSQ01459 385 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 TCP10Q12799 353 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 PPP2R5DQ14738 602 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 PCLAFQ15004 111 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 TAF5Q15542 800 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 UGCGQ16739 394 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 MGAT5BQ3V5L5 792 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF362Q5T0B9 420 aaPredicted RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 FAXCQ5TGI0 409 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 SCARA3Q6AZY7 606 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 UNC5AQ6ZN44 842 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 DCDC5Q6ZRR9 648 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 FASTKD5Q7L8L6 764 aaKnown RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 CPNE9Q8IYJ1 553 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 DSELQ8IZU8 1212 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 CERS5Q8N5B7 392 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 RNF148Q8N7C7 305 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 GSDMBQ8TAX9 411 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 BSNDQ8WZ55 320 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 SERPINI1Q99574 410 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 MXRA8Q9BRK3 442 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 DCUN1D5Q9BTE7 237 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 GCOM2Q9BZD3 368 aaPredicted RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 KMT5AQ9NQR1 393 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms