RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GBP1P32455 592 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 NOS2P35228 1153 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 FLT3P36888 993 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 MATKP42679 507 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 RING1Q06587 406 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 NME3Q13232 169 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 NNTQ13423 1086 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 PON2Q15165 354 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 NUGGCQ68CJ6 796 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 NAIF1Q69YI7 327 aaPredicted RBP12.33□□□□□ -0.44
HPS4-214ENST00000485842 PPP1R2P3Q6NXS1 205 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 DNAJC24Q6P3W2 148 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 RHBDF2Q6PJF5 856 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 BMP8AQ7Z5Y6 402 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 CNGA4Q8IV77 575 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 ADGRG2Q8IZP9 1017 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 OR8K1Q8NGG5 319 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 BHMTQ93088 406 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 RNF34Q969K3 372 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 MSANTD3Q96H12 275 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 FCRL2Q96LA5 508 aaPredicted RBP12.33□□□□□ -0.44
HPS4-214ENST00000485842 DNAJC7Q99615 494 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
HPS4-214ENST00000485842 SELENOOQ9BVL4 669 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 SPHK2Q9NRA0 654 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 ABHD10Q9NUJ1 306 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 ZNHIT6Q9NWK9 470 aaKnown RBP12.33□□□□□ -0.44
HPS4-214ENST00000485842 ARHGAP20Q9P2F6 1191 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 STAP1Q9ULZ2 295 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 TLR6Q9Y2C9 796 aa12.33□□□□□ -0.44
HPS4-214ENST00000485842 KMT2EQ8IZD2 1858 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 F5P12259 2224 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 FAM170BA6NMN3 283 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 NEDD8-MDP1E9PL57 170 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 M0QYT0 321 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 TRDMT1O14717 391 aaKnown RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 IGLV3-25P01717 112 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 KRT3P12035 628 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 TFE3P19532 575 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 AOC1P19801 751 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 RRM1P23921 792 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 HNRNPH3P31942 346 aaKnown RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 MLLT6P55198 1093 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 GSCP56915 257 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 AMPD2Q01433 879 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 GAD2Q05329 585 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 TBX2Q13207 712 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 ZC3H12AQ5D1E8 599 aaKnown RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 OTUD1Q5VV17 481 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 TRNP1Q6NT89 227 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 TMEM25Q86YD3 366 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 UNC45BQ8IWX7 931 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 C3orf20Q8ND61 904 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 PJA1Q8NG27 643 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 JOSD2Q8TAC2 188 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 ZNF653Q96CK0 615 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 CHFRQ96EP1 664 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 CFAP57Q96MR6 1250 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 TBCBQ99426 244 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 NPY6RQ99463 290 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 P2RY13Q9BPV8 354 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 BBS2Q9BXC9 721 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 RRN3Q9NYV6 651 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 PLK2Q9NYY3 685 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 ADAMTS1Q9UHI8 967 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
HPS4-214ENST00000485842 MTF2Q9Y483 593 aaPredicted RBP12.32□□□□□ -0.44
HPS4-214ENST00000485842 A0A087X0T9 212 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 ANKRD62A6NC57 917 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 PI15O43692 258 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 ACSL4O60488 711 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 TSPAN3O60637 253 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 RTN2O75298 545 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
HPS4-214ENST00000485842 DCNP07585 359 aaKnown RBP12.31□□□□□ -0.44
HPS4-214ENST00000485842 FAM228BP0C875 321 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 GZMAP12544 262 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 CHKAP35790 457 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 SLC11A2P49281 568 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 ATP11AP98196 1134 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 DEUP1Q05D60 604 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 KDSRQ06136 332 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 CDO1Q16878 200 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 GAB4Q2WGN9 574 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 WDR59Q6PJI9 974 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 C12orf40Q86WS4 652 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 CCDC105Q8IYK2 499 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 NAT16Q8N8M0 369 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 RXFP2Q8WXD0 754 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 CD101Q93033 1021 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 SLC39A13Q96H72 371 aa12.31□□□□□ -0.44
HPS4-214ENST00000485842 MCEEQ96PE7 176 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms