RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TMEM110Q86TL2 294 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 SLC47A2Q86VL8 602 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 FAM217AQ8IXS0 508 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 CPXM2Q8N436 756 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 FAM160A2Q8N612 972 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-209ENST00000484305 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-209ENST00000484305 GOLGA1Q92805 767 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 VPS16Q9H269 839 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 FANCLQ9NW38 375 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 TJP2Q9UDY2 1190 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 GMEB2Q9UKD1 530 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 CLEC4EQ9ULY5 219 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 NAALADL1Q9UQQ1 740 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 FHOD1Q9Y613 1164 aa13.46□□□□□ -0.25
HDAC1-209ENST00000484305 ABCA7Q8IZY2 2146 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 DCLK1O15075 740 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 TSPAN3O60637 253 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 IGLV3-27P01718 113 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 NCAM1P13591 858 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 TGM1P22735 817 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 PTK2Q05397 1052 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 PDCLQ13371 301 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 RAPGEF1Q13905 1077 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 DRAP1Q14919 205 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-209ENST00000484305 KRT31Q15323 416 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 STX1AQ16623 288 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 EOGTQ5NDL2 527 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 CCDC183Q5T5S1 534 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 EGFLAMQ63HQ2 1017 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 SMYD5Q6GMV2 418 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 ANO7Q6IWH7 933 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
HDAC1-209ENST00000484305 KBTBD6Q86V97 674 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 RASSF3Q86WH2 238 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 MDGA1Q8NFP4 955 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 KCNV2Q8TDN2 545 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 FAM149B1Q96BN6 582 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 CPXM1Q96SM3 734 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 ACOX2Q99424 681 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 LSM14BQ9BX40 385 aaKnown RBP13.45□□□□□ -0.26
HDAC1-209ENST00000484305 NAA15Q9BXJ9 866 aaKnown RBP13.45□□□□□ -0.26
HDAC1-209ENST00000484305 TPSD1Q9BZJ3 242 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 ANO10Q9NW15 660 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 TMEM63CQ9P1W3 806 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 STOML2Q9UJZ1 356 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
HDAC1-209ENST00000484305 THADAQ6YHU6 1953 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 GFRA2O00451 464 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 SART1O43290 800 aaKnown RBP13.44□□□□□ -0.26
HDAC1-209ENST00000484305 CYBBP04839 570 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 RETP07949 1114 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 UCHL3P15374 230 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 WASP42768 502 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 TBX4P57082 545 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 SPEM2Q0P670 501 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 ADGRF1Q5T601 910 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 CACNA2D4Q7Z3S7 1137 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 C1orf131Q8NDD1 294 aaKnown RBP13.44□□□□□ -0.26
HDAC1-209ENST00000484305 ADAM32Q8TC27 787 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 DQX1Q8TE96 717 aaKnown RBP13.44□□□□□ -0.26
HDAC1-209ENST00000484305 DDI1Q8WTU0 396 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 PIWIL1Q96J94 861 aaKnown RBP13.44□□□□□ -0.26
HDAC1-209ENST00000484305 LHX5Q9H2C1 402 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 PARD6AQ9NPB6 346 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 PLCB1Q9NQ66 1216 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 INVSQ9Y283 1065 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 SLC27A6Q9Y2P4 619 aa13.44□□□□□ -0.26
HDAC1-209ENST00000484305 GOLGA6L7A0A1B0GV03 622 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 TCRBV21S2A2A0A5A6 115 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 LATS1O95835 1130 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 HOXD9P28356 352 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-209ENST00000484305 NTSR1P30989 418 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 KRT9P35527 623 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 KLK7P49862 253 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 SGSHP51688 502 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 YWHAZP63104 245 aaKnown RBP13.43□□□□□ -0.26
HDAC1-209ENST00000484305 RING1Q06587 406 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 TAF5Q15542 800 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 GEN1Q17RS7 908 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 MPPE1Q53F39 396 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 NUGGCQ68CJ6 796 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 TRMT11Q7Z4G4 463 aaKnown RBP13.43□□□□□ -0.26
HDAC1-209ENST00000484305 UNC45BQ8IWX7 931 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 HMGB4Q8WW32 186 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 ERLEC1Q96DZ1 483 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 ZC3H10Q96K80 434 aaKnown RBP13.43□□□□□ -0.26
HDAC1-209ENST00000484305 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 FCRL2Q96LA5 508 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-209ENST00000484305 POPDC2Q9HBU9 364 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 POLMQ9NP87 494 aaPredicted RBP13.43□□□□□ -0.26
HDAC1-209ENST00000484305 TLR6Q9Y2C9 796 aa13.43□□□□□ -0.26
HDAC1-209ENST00000484305 DMXL1Q9Y485 3027 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 WASH3PC4AMC7 463 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 CAPN9O14815 690 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 ACSL4O60488 711 aa13.42□□□□□ -0.26
HDAC1-209ENST00000484305 ALDH1A2O94788 518 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms