RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RWDD2BP57060 319 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 SNX16P57768 344 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 SGO2Q562F6 1265 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 ODF2Q5BJF6 829 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 GPR158Q5T848 1215 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 DNAJC24Q6P3W2 148 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 DCUN1D2Q6PH85 259 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 VITQ6UXI7 678 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 DPH6Q7L8W6 267 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 LIMS2Q7Z4I7 341 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 SPATA2LQ8IUW3 424 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-216ENST00000484087 ELMOD1Q8N336 334 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 TTC13Q8NBP0 860 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 MAIP1Q8WWC4 291 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 PSMG2Q969U7 264 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 TMEM176AQ96HP8 235 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 RUNDC3BQ96NL0 473 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 ASB16Q96NS5 453 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 SLC22A12Q96S37 553 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 PNKPQ96T60 521 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 KRT12Q99456 494 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 ACBD6Q9BR61 282 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 LRRC1Q9BTT6 524 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 LHX5Q9H2C1 402 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 SYNCQ9H7C4 482 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 FAM49BQ9NUQ9 324 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.25□□□□□ -1.25
BRCA1-216ENST00000484087 EHD2Q9NZN4 543 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 OGFRQ9NZT2 677 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 STIM2Q9P246 746 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 IP6K2Q9UHH9 426 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 CCL26Q9Y258 94 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 PCDHB5Q9Y5E4 795 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 FRYLO94915 3013 aa7.25□□□□□ -1.25
BRCA1-216ENST00000484087 SLC38A8A6NNN8 435 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 F8VP50 259 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CILPO75339 1184 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 BEST1O76090 585 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 HEXIM1O94992 359 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 FGGP02679 453 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 DCNP07585 359 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 POU2F2P09086 479 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SRFP11831 508 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 DESP17661 470 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 ADORA2BP29275 332 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CDH5P33151 784 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 MAN1A1P33908 653 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CTNNA1P35221 906 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TNNT3P45378 269 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SOX9P48436 509 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 NDST1P52848 882 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 EPHA5P54756 1037 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PRSS12P56730 875 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 INCA1Q0VD86 236 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 CYP4A22Q5TCH4 519 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TXNDC8Q6A555 127 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PLEKHA7Q6IQ23 1121 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 MMS22LQ6ZRQ5 1243 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 ACOT1Q86TX2 421 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 KLHL7Q8IXQ5 586 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 DCP1BQ8IZD4 617 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 KRT222Q8N1A0 295 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TMEM86AQ8N2M4 240 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 FBXL6Q8N531 539 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 C12orf29Q8N999 325 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 C1orf131Q8NDD1 294 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SPPL2BQ8TCT7 592 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 IPO4Q8TEX9 1081 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 HEXIM2Q96MH2 286 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 KCNK16Q96T55 309 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 NT5C1AQ9BXI3 368 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 B3GNT5Q9BYG0 378 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SNX25Q9H3E2 840 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 MFSD1Q9H3U5 465 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TRPC7Q9HCX4 862 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 HEBP1Q9NRV9 189 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SMARCAL1Q9NZC9 954 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 RASAL2Q9UJF2 1139 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 MTF2Q9Y483 593 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PCDHA3Q9Y5H8 950 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 ATG2BQ96BY7 2078 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 C2orf78A6NCI8 922 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SHISA7A6NL88 538 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 HEPACAM2A8MVW5 462 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 M0QYV0 167 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PSTPIP1O43586 416 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PROSCO94903 275 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SEC31AO94979 1220 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 ZRANB2O95218 330 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PTPN1P18031 435 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 TNFRSF8P28908 595 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 PCSK1P29120 753 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 GDI1P31150 447 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 HOXC13P31276 330 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 GNL1P36915 607 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 GRIK1P39086 918 aa7.24□□□□□ -1.25
BRCA1-216ENST00000484087 SSR1P43307 286 aaKnown RBP7.24□□□□□ -1.25
BRCA1-216ENST00000484087 LHX1P48742 406 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms