RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SFMBT1Q9UHJ3 866 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 WASF3Q9UPY6 502 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 SLC27A6Q9Y2P4 619 aa18.87■□□□□ 0.61
ATG4B-221ENST00000483778 PIK3R2O00459 728 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 XPO1O14980 1071 aaKnown RBP18.86■□□□□ 0.61
ATG4B-221ENST00000483778 TSPAN3O60637 253 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 CFIP05156 583 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 CD19P15391 556 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 IL12RB1P42701 662 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 ZNF33AQ06730 810 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 ADIGQ0VDE8 80 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 ST3GAL2Q16842 350 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 FUT11Q495W5 492 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 PKDCCQ504Y2 493 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 SGO2Q562F6 1265 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 SPDYCQ5MJ68 293 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 PEAR1Q5VY43 1037 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-221ENST00000483778 TADA2BQ86TJ2 420 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 FMNL3Q8IVF7 1028 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 TTC39CQ8N584 583 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 TSG101Q99816 390 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 DCLK3Q9C098 648 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 ARMCX3Q9UH62 379 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-221ENST00000483778 MAN1B1Q9UKM7 699 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 ZNF510Q9Y2H8 683 aa18.86■□□□□ 0.61
ATG4B-221ENST00000483778 O00370 1275 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 AP5Z1O43299 807 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 MAOBP27338 520 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 CHKAP35790 457 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 FMO5P49326 533 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 RGS7P49802 495 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 TRIP4Q15650 581 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-221ENST00000483778 BSPRYQ5W0U4 402 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 KIAA1324Q6UXG2 1013 aaKnown RBP18.85■□□□□ 0.61
ATG4B-221ENST00000483778 SLC36A4Q6YBV0 504 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 FAM217AQ8IXS0 508 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 ARHGAP18Q8N392 663 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 TRIML1Q8N9V2 468 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 LMO3Q8TAP4 145 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 CDK5RAP1Q96SZ6 601 aaKnown RBP18.85■□□□□ 0.61
ATG4B-221ENST00000483778 NUSAP1Q9BXS6 441 aaKnown RBP18.85■□□□□ 0.61
ATG4B-221ENST00000483778 DNAI2Q9GZS0 605 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 MKRN2Q9H000 416 aaKnown RBP18.85■□□□□ 0.61
ATG4B-221ENST00000483778 CAPN10Q9HC96 672 aa18.85■□□□□ 0.61
ATG4B-221ENST00000483778 THAP10Q9P2Z0 257 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-221ENST00000483778 GOLGA6L4A6NEF3 574 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 KCNJ18B7U540 433 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 GFRA2O00451 464 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 MSI1O43347 362 aaKnown RBP18.84■□□□□ 0.61
ATG4B-221ENST00000483778 SMC2O95347 1197 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 VDRP11473 427 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 LCP1P13796 627 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 CSRP1P21291 193 aaKnown RBP18.84■□□□□ 0.61
ATG4B-221ENST00000483778 SGSHP51688 502 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 BCAT1P54687 386 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 ZNF252P-AS1Q0IIN9 211 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 BST2Q10589 180 aaKnown RBP18.84■□□□□ 0.61
ATG4B-221ENST00000483778 ENPP2Q13822 863 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 PMF1Q6P1K2 205 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 CPXM2Q8N436 756 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 ZNF419Q96HQ0 510 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-221ENST00000483778 HSPA12BQ96MM6 686 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 LRRC4Q9HBW1 653 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 ELOVL2Q9NXB9 296 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 STRIP2Q9ULQ0 834 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 SLC6A14Q9UN76 642 aa18.84■□□□□ 0.61
ATG4B-221ENST00000483778 PPP1R3GB7ZBB8 358 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 PRKCHP24723 683 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 LRRC63Q05C16 580 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 LMAN2Q12907 356 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 FOXC1Q12948 553 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 ZNF234Q14588 700 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 DUOXA1Q1HG43 343 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 KLHL10Q6JEL2 608 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 TTI2Q6NXR4 508 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 TMEM270Q6UE05 265 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 PIP4P1Q86T03 277 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 ARHGEF19Q8IW93 802 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 CLEC4CQ8WTT0 213 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 DDI1Q8WTU0 396 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 SLC35F5Q8WV83 523 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 TIGD1Q96MW7 591 aa18.83■□□□□ 0.6
ATG4B-221ENST00000483778 GTPBP2Q9BX10 602 aaKnown RBP18.83■□□□□ 0.6
ATG4B-221ENST00000483778 FAM124BQ9H5Z6 455 aaPredicted RBP18.83■□□□□ 0.6
ATG4B-221ENST00000483778 CFAP47Q6ZTR5 3102 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 GOLGA6L7A0A1B0GV03 622 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 GADD45BO75293 160 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-221ENST00000483778 ZNF217O75362 1048 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 SERPINF2P08697 491 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 CEACAM1P13688 526 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 BRD2P25440 801 aaKnown RBP18.82■□□□□ 0.6
ATG4B-221ENST00000483778 HOXD9P28356 352 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-221ENST00000483778 DAOAP59103 153 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 FAM193AP78312 1265 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 LCLAT1Q6UWP7 414 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 RRAGAQ7L523 313 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 KCTD13Q8WZ19 329 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 PLD4Q96BZ4 506 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 CCDC34Q96HJ3 373 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 DHTKD1Q96HY7 919 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms