RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 RAB6BQ9NRW1 208 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 ETNK2Q9NVF9 386 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 TMEM161AQ9NX61 479 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 SAGE1Q9NXZ1 904 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 GGA2Q9UJY4 613 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 FBXW11Q9UKB1 542 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 NAALADL1Q9UQQ1 740 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.35□□□□□ -0.43
SND1-210ENST00000483503 USP3Q9Y6I4 520 aa12.35□□□□□ -0.43
SND1-210ENST00000483503 YJEFN3A6XGL0 299 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 E7ENQ6 273 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 GOLGA8MH3BSY2 632 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 NRP1O14786 923 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 SYN3O14994 580 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 MTSS1O43312 755 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 HOXA2O43364 376 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 DGKIO75912 1065 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 GOT1P17174 413 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 AMPD1P23109 780 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 BDNFP23560 247 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 HTR7P34969 479 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 GEMIN4P57678 1058 aaKnown RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 NME3Q13232 169 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 PAFAH1B3Q15102 231 aaKnown RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 NFE2Q16621 373 aaPredicted RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 UBAP2Q5T6F2 1119 aaKnown RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 OTUD1Q5VV17 481 aaPredicted RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 SYPL2Q5VXT5 272 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 APBB2Q92870 758 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 FUBP3Q96I24 572 aaKnown RBP eCLIP12.34□□□□□ -0.43
SND1-210ENST00000483503 OLFM3Q96PB7 478 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 EPAS1Q99814 870 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 NSRP1Q9H0G5 558 aaKnown RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 XAB2Q9HCS7 855 aaKnown RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 DDIT4Q9NX09 232 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 NKIRAS1Q9NYS0 192 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 DTLQ9NZJ0 730 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 PSMC3IPQ9P2W1 217 aaPredicted RBP12.34□□□□□ -0.43
SND1-210ENST00000483503 RSPH14Q9UHP6 348 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 TSC2P49815 1807 aa12.34□□□□□ -0.43
SND1-210ENST00000483503 FRMPD3Q5JV73 1810 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 SYNJ2BP-COX16A0A087WUM0 186 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 I3L4J1 428 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 DNM1LO00429 736 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 OPHN1O60890 802 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 TMEM63AO94886 807 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 OAZ2O95190 189 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 FYNP06241 537 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 MX2P20592 715 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 SERPINB6P35237 376 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 CCT5P48643 541 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 GLUD2P49448 558 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 CXCR3P49682 368 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 CDK7P50613 346 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 TPI1P60174 286 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 GBE1Q04446 702 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 DPYSQ14117 519 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 TMED2Q15363 201 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 PAN2Q504Q3 1202 aaKnown RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 FNBP1LQ5T0N5 605 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 VSTM1Q6UX27 236 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 C3orf62Q6ZUJ4 267 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 HFE2Q6ZVN8 426 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 GPRIN1Q7Z2K8 1008 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 RTN4RL1Q86UN2 441 aaPredicted RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 COLGALT2Q8IYK4 626 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 ABI1Q8IZP0 508 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 ARHGAP18Q8N392 663 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 FBXO36Q8NEA4 188 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 HTR3CQ8WXA8 447 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 SEPT8Q92599 483 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 CHMP6Q96FZ7 201 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 CYTH2Q99418 400 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 COLEC11Q9BWP8 271 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 OXCT2Q9BYC2 517 aaPredicted RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.33□□□□□ -0.44
SND1-210ENST00000483503 ACSS3Q9H6R3 686 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 WDCPQ9H6R7 721 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 WDR6Q9NNW5 1121 aaKnown RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 KCNK9Q9NPC2 374 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 ABCC13Q9NSE7 274 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 PIGVQ9NUD9 493 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 EURLQ9NYK6 297 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.33□□□□□ -0.44
SND1-210ENST00000483503 COX16Q9P0S2 106 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 SMG5Q9UPR3 1016 aaKnown RBP12.33□□□□□ -0.44
SND1-210ENST00000483503 PCDHB7Q9Y5E2 793 aa12.33□□□□□ -0.44
SND1-210ENST00000483503 A0A0A0MRY4 1105 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms