RNA–Protein interactions for RNA: ENST00000483293.1

PMS1-219, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-219ENST00000483293 RAB21Q9UL25 225 aa6.53□□□□□ -1.36
PMS1-219ENST00000483293 IPO5O00410 1097 aaKnown RBP6.52□□□□□ -1.37
PMS1-219ENST00000483293 C1RP00736 705 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 WT1P19544 449 aaPredicted RBP6.52□□□□□ -1.37
PMS1-219ENST00000483293 THBS4P35443 961 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 IGHMBP2P38935 993 aaKnown RBP6.52□□□□□ -1.37
PMS1-219ENST00000483293 DHX8Q14562 1220 aaKnown RBP6.52□□□□□ -1.37
PMS1-219ENST00000483293 TRIM71Q2Q1W2 868 aaKnown RBP6.52□□□□□ -1.37
PMS1-219ENST00000483293 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 GORABQ5T7V8 394 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 C16orf89Q6UX73 402 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 DCDC5Q6ZRR9 648 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 RD3Q7Z3Z2 195 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.52□□□□□ -1.37
PMS1-219ENST00000483293 HMGB4Q8WW32 186 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 TBC1D20Q96BZ9 403 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 RTKNQ9BST9 563 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 FAM167BQ9BTA0 163 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 ADGRE3Q9BY15 652 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 MYLK2Q9H1R3 596 aa6.52□□□□□ -1.37
PMS1-219ENST00000483293 TP63Q9H3D4 680 aaPredicted RBP6.52□□□□□ -1.37
PMS1-219ENST00000483293 TCRBV5S1A1TA0A578 114 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 MBPP02686 304 aaPredicted RBP6.51□□□□□ -1.37
PMS1-219ENST00000483293 GRK6P43250 576 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 JAK3P52333 1124 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 PNLIPRP1P54315 467 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 AP2B1P63010 937 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 CFHR3Q02985 330 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 PRKG1Q13976 671 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 RPS6KA2Q15349 733 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 ZNF569Q5MCW4 686 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 PRAMEF17Q5VTA0 474 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 CHSY1Q86X52 802 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 SUGP1Q8IWZ8 645 aaKnown RBP6.51□□□□□ -1.37
PMS1-219ENST00000483293 CLASRPQ8N2M8 674 aaKnown RBP6.51□□□□□ -1.37
PMS1-219ENST00000483293 FAM98AQ8NCA5 519 aaKnown RBP6.51□□□□□ -1.37
PMS1-219ENST00000483293 CSGALNACT1Q8TDX6 532 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 C3orf49Q96BT1 292 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 HERPUD2Q9BSE4 406 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 ELAC1Q9H777 363 aaKnown RBP6.51□□□□□ -1.37
PMS1-219ENST00000483293 WDR26Q9H7D7 661 aa6.51□□□□□ -1.37
PMS1-219ENST00000483293 HEMK1Q9Y5R4 338 aaPredicted RBP6.51□□□□□ -1.37
PMS1-219ENST00000483293 MANSC4A6NHS7 340 aaPredicted RBP6.5□□□□□ -1.37
PMS1-219ENST00000483293 KRT38O76015 456 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 MMP8P22894 467 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 VPS41P49754 854 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 SOX10P56693 466 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 GAB1Q13480 694 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 FAM187BQ17R55 369 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 INO80DQ53TQ3 878 aaPredicted RBP6.5□□□□□ -1.37
PMS1-219ENST00000483293 CC2D1BQ5T0F9 858 aaKnown RBP6.5□□□□□ -1.37
PMS1-219ENST00000483293 SUMO4Q6EEV6 95 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 SLC44A2Q8IWA5 706 aaPredicted RBP6.5□□□□□ -1.37
PMS1-219ENST00000483293 SMC5Q8IY18 1101 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 STT3BQ8TCJ2 826 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 ADAMTS18Q8TE60 1221 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 EID2BQ96D98 161 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 REXO5Q96IC2 774 aaKnown RBP6.5□□□□□ -1.37
PMS1-219ENST00000483293 ELOVL1Q9BW60 279 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 VPS16Q9H269 839 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 PABPC3Q9H361 631 aaKnown RBP6.5□□□□□ -1.37
PMS1-219ENST00000483293 TAF1DQ9H5J8 278 aaPredicted RBP6.5□□□□□ -1.37
PMS1-219ENST00000483293 MYH16Q9H6N6 1097 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 ABHD10Q9NUJ1 306 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 C11orf21Q9P2W6 132 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 FZD4Q9ULV1 537 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 DAPP1Q9UN19 280 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 CNTN6Q9UQ52 1028 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 AOX1Q06278 1338 aa6.5□□□□□ -1.37
PMS1-219ENST00000483293 SF3A3Q12874 501 aaKnown RBP eCLIP6.49□□□□□ -1.374e-6■■■■□ 22.2
PMS1-219ENST00000483293 SLC14A1Q13336 389 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 KCNB1Q14721 858 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 ZRSR2Q15696 482 aaKnown RBP6.49□□□□□ -1.37
PMS1-219ENST00000483293 FCRLBQ6BAA4 426 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 ACSM6Q6P461 480 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 TRABD2AQ86V40 505 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 ADGRG3Q86Y34 549 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 NKAPQ8N5F7 415 aaKnown RBP6.49□□□□□ -1.37
PMS1-219ENST00000483293 SPATA5Q8NB90 893 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 TRAPPC12Q8WVT3 735 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 OVCA2Q8WZ82 227 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 NPIPB3Q92617 1050 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 TRIM63Q969Q1 353 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 RILPL2Q969X0 211 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 RITA1Q96K30 269 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 TRAPPC9Q96Q05 1148 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 ITM2CQ9NQX7 267 aa6.49□□□□□ -1.37
PMS1-219ENST00000483293 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.49□□□□□ -1.37
PMS1-219ENST00000483293 TRPC5Q9UL62 973 aaPredicted RBP6.49□□□□□ -1.37
PMS1-219ENST00000483293 FAM90A18PA6NE21 464 aa6.48□□□□□ -1.37
PMS1-219ENST00000483293 FAM90A16PA6NEW6 464 aa6.48□□□□□ -1.37
PMS1-219ENST00000483293 FAM90A9PA6NNJ1 464 aa6.48□□□□□ -1.37
PMS1-219ENST00000483293 FAM90A5PA8MXJ8 464 aa6.48□□□□□ -1.37
PMS1-219ENST00000483293 EIF3JO75822 258 aaKnown RBP6.48□□□□□ -1.37
PMS1-219ENST00000483293 FAM90A15PP0C7V4 464 aa6.48□□□□□ -1.37
PMS1-219ENST00000483293 FAM90A14PP0C7W9 464 aa6.48□□□□□ -1.37
PMS1-219ENST00000483293 VEGFAP15692 232 aaPredicted RBP6.48□□□□□ -1.37
PMS1-219ENST00000483293 ATF7P17544 494 aaPredicted RBP6.48□□□□□ -1.37
PMS1-219ENST00000483293 PPM1FP49593 454 aaPredicted RBP6.48□□□□□ -1.37
PMS1-219ENST00000483293 AGTR2P50052 363 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms