RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 C15orf59Q2T9L4 293 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 PPP1R15BQ5SWA1 713 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 ZNF662Q6ZS27 426 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 RHOT2Q8IXI1 618 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 BPIFB1Q8TDL5 484 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 LRRC3BQ96PB8 259 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 TBCBQ99426 244 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 DDX23Q9BUQ8 820 aaKnown RBP20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 TRIM7Q9C029 511 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 SALL4Q9UJQ4 1053 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 PAXBP1Q9Y5B6 917 aa20.75■□□□□ 0.91
TRAPPC12-220ENST00000482645 A0A0A6YYK5 440 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 BTNL10A8MVZ5 291 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 TBX4P57082 545 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 ZNF77Q15935 545 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 SLC25A52Q3SY17 297 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 DDX42Q86XP3 938 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 YAF2Q8IY57 180 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 SLC35G2Q8TBE7 412 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 ZNF564Q8TBZ8 553 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 ADAMTS19Q8TE59 1207 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 RNF34Q969K3 372 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 WBP2Q969T9 261 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 E2F7Q96AV8 911 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 A0A0C4DFX4 3053 aa20.74■□□□□ 0.91
TRAPPC12-220ENST00000482645 IRAK2O43187 625 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 ECI2O75521 394 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 STC2O76061 302 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 MOCS3O95396 460 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 GBP1P32455 592 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 USP4Q13107 963 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 CCDC14Q49A88 953 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 CC2D1AQ6P1N0 951 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 ARCQ7LC44 396 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 NPY6RQ99463 290 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 ADAM33Q9BZ11 813 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 RRN3Q9NYV6 651 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 CALCOCO1Q9P1Z2 691 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 UVRAGQ9P2Y5 699 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 ANAPC7Q9UJX3 599 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 HBS1LQ9Y450 684 aaKnown RBP20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 MYO10Q9HD67 2058 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 ESPNB1AK53 854 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 PSMC3P17980 439 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 OGDHQ02218 1023 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 DEUP1Q05D60 604 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 TRIP4Q15650 581 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 SH3PXD2AQ5TCZ1 1133 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 OTUD1Q5VV17 481 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 MFSD6LQ8IWD5 586 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 ZFYVE19Q96K21 471 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 BTBD6Q96KE9 485 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 IGSF9Q9P2J2 1179 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 LSM7Q9UK45 103 aaKnown RBP20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 TLR6Q9Y2C9 796 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 CAPN6Q9Y6Q1 641 aa20.73■□□□□ 0.91
TRAPPC12-220ENST00000482645 TMEM191CA6NGB0 347 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 MOCS2O96007 188 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 PSMA2P25787 234 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 CORO1AP31146 461 aaKnown RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 HARS2P49590 506 aaKnown RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 KPNA1P52294 538 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 ZNF143P52747 638 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 ATXN1P54253 815 aaKnown RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 SND1Q7KZF4 910 aaKnown RBP eCLIP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 DENND1CQ8IV53 801 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 GJD3Q8N144 294 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 FAM172AQ8WUF8 416 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 PLD4Q96BZ4 506 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 IRX2Q9BZI1 471 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 PIGVQ9NUD9 493 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 THG1LQ9NWX6 298 aaKnown RBP20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 OBP2AQ9NY56 170 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 WNT6Q9Y6F9 365 aa20.72■□□□□ 0.91
TRAPPC12-220ENST00000482645 C19orf67A6NJJ6 358 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 IGLV3-25P01717 112 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 DESP17661 470 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 GDI1P31150 447 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 RAB6CQ53S08 254 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 ZC3H12AQ5D1E8 599 aaKnown RBP20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 SLC44A3Q8N4M1 653 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 DEPDC1BQ8WUY9 529 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 NT5C3BQ969T7 300 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 NXPE3Q969Y0 559 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 FCRL2Q96LA5 508 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 C16orf45Q96MC5 204 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 TRMT61BQ9BVS5 477 aaKnown RBP20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 RAB6CQ9H0N0 254 aa20.71■□□□□ 0.91
TRAPPC12-220ENST00000482645 TMEM110-MUSTN1A8MSY1 372 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 KIF5CO60282 957 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 APOEP02649 317 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 RDXP35241 583 aaKnown RBP20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 PTPN9P43378 593 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 NNTQ13423 1086 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 IFI16Q16666 785 aaKnown RBP20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 TRIM68Q6AZZ1 485 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 FAM131BQ86XD5 332 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 BBS7Q8IWZ6 715 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 ALS2CR12Q96Q35 445 aa20.7■□□□□ 0.9
TRAPPC12-220ENST00000482645 CNPY3Q9BT09 278 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms