RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 LHX5Q9H2C1 402 aa10.44□□□□□ -0.74
SPTLC1-206ENST00000482632 LMAN1LQ9HAT1 526 aa10.44□□□□□ -0.74
SPTLC1-206ENST00000482632 RBM12Q9NTZ6 932 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-206ENST00000482632 SPATA6Q9NWH7 488 aaPredicted RBP10.44□□□□□ -0.74
SPTLC1-206ENST00000482632 TSR3Q9UJK0 312 aaKnown RBP10.44□□□□□ -0.74
SPTLC1-206ENST00000482632 ZNF318Q5VUA4 2279 aa10.44□□□□□ -0.74
SPTLC1-206ENST00000482632 SPTBN4Q9H254 2564 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 KIAA1549LQ6ZVL6 1849 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 NEDD8-MDP1E9PL57 170 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 TRDMT1O14717 391 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 MOCS2O96007 188 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 ERBB2P04626 1255 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 CCDC172P0C7W6 258 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 HARS2P49590 506 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 GRSF1Q12849 480 aaKnown RBP eCLIP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 PTPN20Q4JDL3 420 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 C2CD6Q53TS8 623 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 FAM102AQ5T9C2 384 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 NAIF1Q69YI7 327 aaPredicted RBP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 C1orf228Q6PIY5 440 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 TOGARAM2Q6ZUX3 1019 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 PHLDB2Q86SQ0 1253 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 ZNF677Q86XU0 584 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 SCML4Q8N228 414 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 WDTC1Q8N5D0 677 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 DTWD2Q8NBA8 298 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 ADAM32Q8TC27 787 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 CD101Q93033 1021 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 RNF34Q969K3 372 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 PLD4Q96BZ4 506 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 OTUB2Q96DC9 234 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 PIWIL1Q96J94 861 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 P2RY13Q9BPV8 354 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 DDX23Q9BUQ8 820 aaKnown RBP10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 BBS2Q9BXC9 721 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 DCLK3Q9C098 648 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 FAM204AQ9H8W3 233 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 SPHK2Q9NRA0 654 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 NAALADL1Q9UQQ1 740 aa10.43□□□□□ -0.74
SPTLC1-206ENST00000482632 A0A1W2PQC6 194 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 LRRC53A6NM62 1247 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 CBFA2T2O43439 604 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 LAMTOR5O43504 91 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 TSPAN3O60637 253 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 LSM8O95777 96 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 FERP16591 822 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 GALK1P51570 392 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 SEC13P55735 322 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 TBX4P57082 545 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 YWHAZP63104 245 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 NOMO3P69849 1222 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 FMO1Q01740 532 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 CDR2Q01850 454 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 GAD2Q05329 585 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 NR1I3Q14994 352 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 TAF5Q15542 800 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 TDRD12Q587J7 1177 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 DCAF6Q58WW2 860 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 EFHC1Q5JVL4 640 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 SFMBT2Q5VUG0 894 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 RHBDF2Q6PJF5 856 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 HTR3DQ70Z44 454 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 TMEM110Q86TL2 294 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 TMEM25Q86YD3 366 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 ADGRG2Q8IZP9 1017 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 SLC30A5Q8TAD4 765 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 DQX1Q8TE96 717 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 DDX1Q92499 740 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 C18orf8Q96DM3 657 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 C11orf70Q9BRQ4 267 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 OSBPL6Q9BZF3 934 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 XPO4Q9C0E2 1151 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 POPDC2Q9HBU9 364 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 PLK2Q9NYY3 685 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 NOCTQ9UK39 431 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 ZNF510Q9Y2H8 683 aa10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 HBS1LQ9Y450 684 aaKnown RBP10.42□□□□□ -0.74
SPTLC1-206ENST00000482632 TMCO5BA8MYB1 307 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 H0Y858 1186 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 HSF2BPO75031 334 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 EGFP01133 1207 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 APOEP02649 317 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 CYBBP04839 570 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 APODP05090 189 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 CHRNB2P17787 502 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 TNFAIP3P21580 790 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 NSFP46459 744 aaKnown RBP10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 SLC6A11P48066 632 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 CDK17Q00537 523 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 SLC6A3Q01959 620 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 NME3Q13232 169 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 TRIP4Q15650 581 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 DGKKQ5KSL6 1271 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 SYPL2Q5VXT5 272 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 FSTL4Q6MZW2 842 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 MSANTD2Q6P1R3 559 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 TRIM72Q6ZMU5 477 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 MMS22LQ6ZRQ5 1243 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 Q6ZS52 159 aa10.41□□□□□ -0.74
SPTLC1-206ENST00000482632 TAC4Q86UU9 113 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms