RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 KRT72Q14CN4 511 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 PPP1R26Q5T8A7 1209 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-220ENST00000482507 IQSEC1Q6DN90 963 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 SCUBE3Q8IX30 993 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 EXOC8Q8IYI6 725 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 OR6J1Q8NGC5 347 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 MICAL1Q8TDZ2 1067 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 ANKRD27Q96NW4 1050 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 B3GNT5Q9BYG0 378 aa15.4■□□□□ 0.06
ATG4B-220ENST00000482507 PRMT7Q9NVM4 692 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-220ENST00000482507 HBP1O60381 514 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 RARBP10826 455 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 ATP6V1C1P21283 382 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 CCNFP41002 786 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 GBE1Q04446 702 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 TMEM132DQ14C87 1099 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 TEX44Q53QW1 395 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 SIGLEC10Q96LC7 697 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 TRIM6Q9C030 488 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-220ENST00000482507 SMARCAD1Q9H4L7 1026 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 ZNF180Q9UJW8 692 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 IGHA2P01877 340 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 APOEP02649 317 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 VTNP04004 478 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 INSRRP14616 1297 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 TGM2P21980 687 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 MAGEA3P43357 314 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 HDAC4P56524 1084 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 BEX3Q00994 111 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 OCRLQ01968 901 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 PDK2Q15119 407 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 RCN1Q15293 331 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 PPP6R3Q5H9R7 873 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-220ENST00000482507 SPDL1Q96EA4 605 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 ACAP3Q96P50 834 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 NFKBIZQ9BYH8 718 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 ASB7Q9H672 318 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 FAM49BQ9NUQ9 324 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 NMRK1Q9NWW6 199 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 SIRPGQ9P1W8 387 aa15.39■□□□□ 0.05
ATG4B-220ENST00000482507 A6NHS1 94 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 CAPN14A8MX76 684 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 DPYSL4O14531 572 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 PPEF2O14830 753 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 PAPSS1O43252 624 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 KRT37O76014 449 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 ESRRAP11474 423 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 CHI3L2Q15782 390 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 FAM187BQ17R55 369 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 PKDCCQ504Y2 493 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 BOLA3Q53S33 107 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 UNC5BQ8IZJ1 945 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 MRPL45Q9BRJ2 306 aaKnown RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 OSBPL1AQ9BXW6 950 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 IQCGQ9H095 443 aaKnown RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 KLC2Q9H0B6 622 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 PCMTD2Q9NV79 361 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 DPP3Q9NY33 737 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 MARCOQ9UEW3 520 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 GNEQ9Y223 722 aaKnown RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 PHKA2P46019 1235 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 TUBP50607 506 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 C1QTNF8P60827 252 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 TMPRSS15P98073 1019 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 CACNB2Q08289 660 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 MDH1BQ5I0G3 518 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 MROH9Q5TGP6 573 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 ACOT1Q86TX2 421 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 ARID3BQ8IVW6 561 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 MAP7D3Q8IWC1 876 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 PPTC7Q8NI37 304 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 CLEC4CQ8WTT0 213 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 TEKT4Q8WW24 435 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 ZNF333Q96JL9 665 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 C7orf26Q96N11 449 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 TUBB6Q9BUF5 446 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 NT5C1AQ9BXI3 368 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 CFHR5Q9BXR6 569 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 SLC17A6Q9P2U8 582 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 SRRDQ9UH36 339 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 CORO1CQ9ULV4 474 aaPredicted RBP15.38■□□□□ 0.05
ATG4B-220ENST00000482507 MFHAS1Q9Y4C4 1052 aa15.38■□□□□ 0.05
ATG4B-220ENST00000482507 FAM159BA6NKW6 160 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 TRDMT1O14717 391 aaKnown RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 LIN7AO14910 233 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 HCRTO43612 131 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 TBX10O75333 385 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 LGALS2P05162 132 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 PDHA1P08559 390 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 KITP10721 976 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 P4HA1P13674 534 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 FAM91A1Q658Y4 838 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 CAPRIN2Q6IMN6 1127 aaKnown RBP15.37■□□□□ 0.05
ATG4B-220ENST00000482507 TLK2Q86UE8 772 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 VPS52Q8N1B4 723 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 LINC01465Q8N7H1 131 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 DNAJC9Q8WXX5 260 aa15.37■□□□□ 0.05
ATG4B-220ENST00000482507 E2F7Q96AV8 911 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms