RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 C2orf78A6NCI8 922 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 PGRMC1O00264 195 aaKnown RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 RIOK3O14730 519 aaKnown RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 OAS1P00973 400 aaKnown RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 FGGP02679 453 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 CD48P09326 243 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 CDC25CP30307 473 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 L1CAMP32004 1257 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 CCR1P32246 355 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 EPHA5P54756 1037 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 COPS2P61201 443 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 CYP4F8P98187 520 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 NNTQ13423 1086 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 PPP2R5DQ14738 602 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 PDK2Q15119 407 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 LONRF2Q1L5Z9 754 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 TCEAL5Q5H9L2 206 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 BRMS1LQ5PSV4 323 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 TXNDC8Q6A555 127 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 KLHDC10Q6PID8 442 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 PSTKQ8IV42 348 aaKnown RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 C12orf76Q8N812 135 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 MRPS31Q92665 395 aaKnown RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 ZNF707Q96C28 371 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 SLC39A13Q96H72 371 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 FCRL2Q96LA5 508 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 GCNAQ96QF7 691 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 RNF38Q9H0F5 515 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 ATXN3LQ9H3M9 355 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 PCDH18Q9HCL0 1135 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 TRPC7Q9HCX4 862 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.25■□□□□ 0.51
UPF3A-206ENST00000480362 ARHGEF38Q9NXL2 777 aa18.25■□□□□ 0.51
UPF3A-206ENST00000480362 A0A1W2PRU2 124 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 I6L893 689 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 FGF19O95750 216 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 RHOP08100 348 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 HMBSP08397 361 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 POU2F2P09086 479 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 KRT10P13645 584 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 GJA1P17302 382 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 CDKN2BP42772 138 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 SCAPQ12770 1279 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 HYAL1Q12794 435 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 DPYSL3Q14195 570 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 CLUL1Q15846 466 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 DPYSL2Q16555 572 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 TFDP3Q5H9I0 405 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 EFHC2Q5JST6 749 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 PDZD4Q76G19 769 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 ADAT2Q7Z6V5 191 aaKnown RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 SLC13A5Q86YT5 568 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 MAP7D3Q8IWC1 876 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 PYROXD2Q8N2H3 581 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 CEP112Q8N8E3 955 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 FAM71BQ8TC56 605 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 KCTD15Q96SI1 283 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 CYP2S1Q96SQ9 504 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 HERPUD2Q9BSE4 406 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 HEMGNQ9BXL5 484 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 CALN1Q9BXU9 219 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 OSBPL8Q9BZF1 889 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 TTYH1Q9H313 450 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 PIDD1Q9HB75 910 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 MTMR10Q9NXD2 777 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 LMCD1Q9NZU5 365 aa18.24■□□□□ 0.51
UPF3A-206ENST00000480362 HBS1LQ9Y450 684 aaKnown RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-206ENST00000480362 hCG_1818297A0A087WSY0 165 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 TMEM265A0A087WTH1 108 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 KCNU1A8MYU2 1149 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 NRG2O14511 850 aaPredicted RBP18.23■□□□□ 0.51
UPF3A-206ENST00000480362 SLC2A3P11169 496 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 PTPN7P35236 360 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 CCR2P41597 374 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 KPNA1P52294 538 aaPredicted RBP18.23■□□□□ 0.51
UPF3A-206ENST00000480362 NTHL1P78549 312 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 MMRN1Q13201 1228 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 GRIN2CQ14957 1233 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 TAZQ16635 292 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
UPF3A-206ENST00000480362 KAZNQ674X7 775 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 GRASPQ7Z6J2 395 aaPredicted RBP18.23■□□□□ 0.51
UPF3A-206ENST00000480362 EFHBQ8N7U6 833 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 LEMD2Q8NC56 503 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 MNS1Q8NEH6 495 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 SMG7Q92540 1137 aaKnown RBP18.23■□□□□ 0.51
UPF3A-206ENST00000480362 NAP1L3Q99457 506 aaPredicted RBP18.23■□□□□ 0.51
UPF3A-206ENST00000480362 SFXN1Q9H9B4 322 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 DZANK1Q9NVP4 752 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 ANAPC1Q9H1A4 1944 aa18.23■□□□□ 0.51
UPF3A-206ENST00000480362 PDE4DIPQ5VU43 2346 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 TCRBV7S2A1N4TA0A589 114 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 CTAGE15A4D2H0 777 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 LINC01565O15544 149 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 SLU7O95391 586 aaKnown RBP18.22■□□□□ 0.51
UPF3A-206ENST00000480362 IGLV3-27P01718 113 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 CTAGE8P0CG41 777 aa18.22■□□□□ 0.51
UPF3A-206ENST00000480362 MBL2P11226 248 aaPredicted RBP18.22■□□□□ 0.51
UPF3A-206ENST00000480362 HDCP19113 662 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms