RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 FAM217AQ8IXS0 508 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 ADAM32Q8TC27 787 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 FCRL2Q96LA5 508 aaPredicted RBP20.55■□□□□ 0.88
LIME1-205ENST00000480139 CCDC42Q96M95 316 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 CHP1Q99653 195 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 C8orf33Q9H7E9 229 aaPredicted RBP20.55■□□□□ 0.88
LIME1-205ENST00000480139 ECT2Q9H8V3 914 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 FAM204AQ9H8W3 233 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 NHEJ1Q9H9Q4 299 aaPredicted RBP20.55■□□□□ 0.88
LIME1-205ENST00000480139 PARVAQ9NVD7 372 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 GTSE1Q9NYZ3 720 aa20.55■□□□□ 0.88
LIME1-205ENST00000480139 AGO1Q9UL18 857 aaKnown RBP20.55■□□□□ 0.88
LIME1-205ENST00000480139 TECTAO75443 2155 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 C2CD4BA6NLJ0 364 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 F9P00740 461 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 SLC2A3P11169 496 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 PTPN9P43378 593 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 NR1H3Q13133 447 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 OTUD1Q5VV17 481 aaPredicted RBP20.54■□□□□ 0.88
LIME1-205ENST00000480139 TRNP1Q6NT89 227 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 RALGPS2Q86X27 583 aaPredicted RBP20.54■□□□□ 0.88
LIME1-205ENST00000480139 CPXM2Q8N436 756 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 SHDQ96IW2 340 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 HEBP1Q9NRV9 189 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.54■□□□□ 0.882e-10■■□□□ 12.5
LIME1-205ENST00000480139 DDIT4Q9NX09 232 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 SCINQ9Y6U3 715 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 TRIOO75962 3097 aa20.54■□□□□ 0.88
LIME1-205ENST00000480139 KRBA1A5PL33 1030 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 ANKRD62A6NC57 917 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 OTOL1A6NHN0 477 aaPredicted RBP20.53■□□□□ 0.88
LIME1-205ENST00000480139 GOLGA6L6A8MZA4 724 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 M0QYT0 321 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 SCAMP3O14828 347 aaKnown RBP20.53■□□□□ 0.88
LIME1-205ENST00000480139 AKR1B10O60218 316 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 ENDOD1O94919 500 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 ADH1CP00326 375 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 CYP17A1P05093 508 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 RFC1P35251 1148 aaPredicted RBP20.53■□□□□ 0.88
LIME1-205ENST00000480139 CHKAP35790 457 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 SULT1E1P49888 294 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 STARD6P59095 220 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 AMPD2Q01433 879 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 GFPT1Q06210 699 aaPredicted RBP20.53■□□□□ 0.88
LIME1-205ENST00000480139 MAMLD1Q13495 774 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 PPP2R5DQ14738 602 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 CCDC122Q5T0U0 273 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 PHLDB2Q86SQ0 1253 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 DENND1CQ8IV53 801 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 SIX5Q8N196 739 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 EMC1Q8N766 993 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 JOSD2Q8TAC2 188 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 ZNF653Q96CK0 615 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 IRX2Q9BZI1 471 aaPredicted RBP20.53■□□□□ 0.88
LIME1-205ENST00000480139 EPHX3Q9H6B9 360 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 MARK1Q9P0L2 795 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 CNOT8Q9UFF9 292 aaKnown RBP20.53■□□□□ 0.88
LIME1-205ENST00000480139 CA14Q9ULX7 337 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 PIAS3Q9Y6X2 628 aa20.53■□□□□ 0.88
LIME1-205ENST00000480139 APOEP02649 317 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 PDGFRAP16234 1089 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 SDC4P31431 198 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 CCR1P32246 355 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 SLC11A2P49281 568 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 DHCR24Q15392 516 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 IER5LQ5T953 404 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 RHBDF2Q6PJF5 856 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 RXFP2Q8WXD0 754 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 CFAP57Q96MR6 1250 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 MCEEQ96PE7 176 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 TBCBQ99426 244 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 ADAM33Q9BZ11 813 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 MRPL47Q9HD33 250 aaKnown RBP20.52■□□□□ 0.88
LIME1-205ENST00000480139 SPHK2Q9NRA0 654 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 PAXBP1Q9Y5B6 917 aa20.52■□□□□ 0.88
LIME1-205ENST00000480139 TMEM221A6NGB7 291 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 KCNU1A8MYU2 1149 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 SPECC1L-ADORA2AF8WAN1 911 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 M0R296 226 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 DLL1O00548 723 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 MAN2B1O00754 1011 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 HOXC11O43248 304 aaPredicted RBP20.51■□□□□ 0.87
LIME1-205ENST00000480139 GJB6O95452 261 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 GPD1P21695 349 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 CTHP32929 405 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 GJA4P35212 333 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 CXCR3P49682 368 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 ZNF143P52747 638 aaPredicted RBP20.51■□□□□ 0.87
LIME1-205ENST00000480139 NME3Q13232 169 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 CCDC14Q49A88 953 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 ZC3H12AQ5D1E8 599 aaKnown RBP20.51■□□□□ 0.87
LIME1-205ENST00000480139 BRMS1LQ5PSV4 323 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 ADGRF1Q5T601 910 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 DCUN1D2Q6PH85 259 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 TPRG1Q6ZUI0 275 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 SND1Q7KZF4 910 aaKnown RBP eCLIP20.51■□□□□ 0.87
LIME1-205ENST00000480139 STRADAQ7RTN6 431 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 DNAAF5Q86Y56 855 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 CCDC170Q8IYT3 715 aa20.51■□□□□ 0.87
LIME1-205ENST00000480139 CENPIQ92674 756 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms