RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 CYP4V2Q6ZWL3 525 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 SND1Q7KZF4 910 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 POLNQ7Z5Q5 900 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 ADAM32Q8TC27 787 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 ING5Q8WYH8 240 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 CD101Q93033 1021 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 NACA2Q9H009 215 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 ARHGEF38Q9NXL2 777 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 OBP2AQ9NY56 170 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 SFMBT1Q9UHJ3 866 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 ALG6Q9Y672 507 aa13.05□□□□□ -0.32
TRAPPC12-218ENST00000479897 SLC12A8A0AV02 714 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 KCNU1A8MYU2 1149 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 KIF5CO60282 957 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 PALMO75781 387 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 STC2O76061 302 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 COMTP21964 271 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 MSNP26038 577 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 MIPP30301 263 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 CCR1P32246 355 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 TBX4P57082 545 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 SKIV2LQ15477 1246 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 RAB6CQ53S08 254 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 ACBD5Q5T8D3 534 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 CC2D1AQ6P1N0 951 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 MIB1Q86YT6 1006 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 PSTKQ8IV42 348 aaKnown RBP13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 MAFAQ8NHW3 353 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 TEKT4Q8WW24 435 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 AZIN2Q96A70 460 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 ASB16Q96NS5 453 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 RAB6CQ9H0N0 254 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 SLITRK6Q9H5Y7 841 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.325e-7■■■■□ 20.2
TRAPPC12-218ENST00000479897 EPS15L1Q9UBC2 864 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 USP18Q9UMW8 372 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 CPQQ9Y646 472 aa13.04□□□□□ -0.32
TRAPPC12-218ENST00000479897 MIF4GDA9UHW6 222 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 SPOPO43791 374 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 PRPSAP2O60256 369 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 GREM1O60565 184 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 PRAMEF12O95522 483 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 APOEP02649 317 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 CTNNA2P26232 953 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 CTNNA1P35221 906 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 ZXDBP98169 803 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 NME3Q13232 169 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 SMAD2Q15796 467 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 CLUL1Q15846 466 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 ZNF77Q15935 545 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 Q6ZNB5 142 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 FAM131BQ86XD5 332 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 CPNE8Q86YQ8 564 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 UNC45BQ8IWX7 931 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 ZSCAN18Q8TBC5 510 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 USP13Q92995 863 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 ZSWIM3Q96MP5 696 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 MYADMQ96S97 322 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 CYP2S1Q96SQ9 504 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 IRX2Q9BZI1 471 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 DCLK3Q9C098 648 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 GOLPH3Q9H4A6 298 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 STOML2Q9UJZ1 356 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
TRAPPC12-218ENST00000479897 E2F8A0AVK6 867 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 LEFTY2O00292 366 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 KRT7P08729 469 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 LAMP2P13473 410 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 TCF4P15884 667 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 FCARP24071 287 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 IL1R2P27930 398 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 TAS2R40P59535 323 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 NRG1Q02297 640 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 BOLA3Q53S33 107 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 ZC3H12AQ5D1E8 599 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 DAB2IPQ5VWQ8 1189 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 HTR3DQ70Z44 454 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 PEX26Q7Z412 305 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 VSIG1Q86XK7 387 aa13.02□□□□□ -0.33
TRAPPC12-218ENST00000479897 ARID3BQ8IVW6 561 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms