RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 KHNYNO15037 678 aaKnown RBP18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 IL12RB1P42701 662 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 MAPK8P45983 427 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 LIMK1P53667 647 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 YWHAEP62258 255 aaKnown RBP18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 APBA1Q02410 837 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 TRIM61Q5EBN2 209 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 BSPRYQ5W0U4 402 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 PM20D1Q6GTS8 502 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 PSAPL1Q6NUJ1 521 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 PMF1Q6P1K2 205 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 GJB7Q6PEY0 223 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 TRMT11Q7Z4G4 463 aaKnown RBP18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 ZNF366Q8N895 744 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 RBBP8NLQ8NC74 664 aaPredicted RBP18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 OR2I1PQ8NGU4 316 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 DDI1Q8WTU0 396 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 CEP63Q96MT8 703 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 SRRTQ9BXP5 876 aaKnown RBP18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 MIS12Q9H081 205 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 METTL14Q9HCE5 456 aaKnown RBP18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 STARD13Q9Y3M8 1113 aa18.18■□□□□ 0.5
ECHDC1-216ENST00000479525 IGHV1OR15-9A0A0B4J2B8 117 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 GOLGA6L7A0A1B0GV03 622 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 PENKP01210 267 aaPredicted RBP18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 TBXAS1P24557 533 aaPredicted RBP18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 DAOAP59103 153 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 KCNH2Q12809 1159 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 PKDCCQ504Y2 493 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 TMEM215Q68D42 235 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 SDE2Q6IQ49 451 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 NUDT18Q6ZVK8 323 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 SLC41A1Q8IVJ1 513 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 ARHGAP18Q8N392 663 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 FAXDC2Q96IV6 333 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 KREMEN1Q96MU8 473 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 UBXN6Q9BZV1 441 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 ACP6Q9NPH0 428 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 STON1Q9Y6Q2 735 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 NUMA1Q14980 2115 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 FAM170AA1A519 330 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 CDX4O14627 284 aaPredicted RBP18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 CFIP05156 583 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 HLA-EP13747 358 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 NUMBP49757 651 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 PAK1Q13153 545 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 PREPLQ4J6C6 727 aaPredicted RBP18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 LYSMD4Q5XG99 296 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 RFWD3Q6PCD5 774 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 LCLAT1Q6UWP7 414 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 WFDC5Q8TCV5 224 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 RNF139Q8WU17 664 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 CDK5RAP1Q96SZ6 601 aaKnown RBP18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 GABRG3Q99928 467 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 CRACR2AQ9BSW2 395 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 DCLK3Q9C098 648 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 CIPCQ9C0C6 399 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 INTS2Q9H0H0 1204 aaKnown RBP18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 FBXO10Q9UK96 956 aa18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.17■□□□□ 0.5
ECHDC1-216ENST00000479525 PCDH15Q96QU1 1955 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 FOXD2O60548 495 aaPredicted RBP18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 KCNK5O95279 499 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 KRT5P13647 590 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 PRKCHP24723 683 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 MAOBP27338 520 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 CHKAP35790 457 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 ZNF234Q14588 700 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 TRIP4Q15650 581 aaPredicted RBP18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 FUT11Q495W5 492 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 C11orf74Q86VG3 221 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 TRIM59Q8IWR1 403 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 ZNF276Q8N554 614 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 ADAM32Q8TC27 787 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 CYB5D2Q8WUJ1 264 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 PLD4Q96BZ4 506 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 PIWIL1Q96J94 861 aaKnown RBP18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 MRGPRX1Q96LB2 322 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 LSM14BQ9BX40 385 aaKnown RBP18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 ZNF510Q9Y2H8 683 aa18.16■□□□□ 0.5
ECHDC1-216ENST00000479525 NYNRINQ9P2P1 1898 aaKnown RBP18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 CYBBP04839 570 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 HOXD9P28356 352 aaPredicted RBP18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 NOVA1P51513 510 aaKnown RBP18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 DENND1BQ6P3S1 775 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 ANKS1BQ7Z6G8 1248 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 EHBP1Q8NDI1 1231 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 SLC35F5Q8WV83 523 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 MYEOVQ96EZ4 313 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 HSPA12BQ96MM6 686 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 GTPBP2Q9BX10 602 aaKnown RBP18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 MKRN2Q9H000 416 aaKnown RBP18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 TMEM9BQ9NQ34 198 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 ST7Q9NRC1 585 aa18.15■□□□□ 0.5
ECHDC1-216ENST00000479525 TP53BP1Q12888 1972 aaPredicted RBP18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 BICDL2A1A5D9 508 aa18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 TOP3BO95985 862 aaKnown RBP18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 AFPP02771 609 aaKnown RBP18.14■□□□□ 0.49
ECHDC1-216ENST00000479525 PAEPP09466 180 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms